RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 HSPA1LP34931 641 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 RFC2P35250 354 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ATP6V1E1P36543 226 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ARHGDIBP52566 201 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 CXCL6P80162 114 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 MYBPC1Q00872 1141 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 EIF2B1Q14232 305 aaKnown RBP2.49□□□□□ -2.01
TARDBP-208ENST00000477447 SMC1AQ14683 1233 aaKnown RBP2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF699Q32M78 642 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 RNF212Q495C1 297 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 CCDC40Q4G0X9 1142 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 WDR88Q6ZMY6 472 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 GCNT7Q6ZNI0 430 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 MIER3Q7Z3K6 550 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ADGRD2Q7Z7M1 963 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ERICH1Q86X53 443 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 UNC5CLQ8IV45 518 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 HSCBQ8IWL3 235 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 CENPSQ8N2Z9 138 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF397Q8NF99 534 aaPredicted RBP2.49□□□□□ -2.01
TARDBP-208ENST00000477447 SLC13A3Q8WWT9 602 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 SIGLEC12Q96PQ1 595 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 TSPAN18Q96SJ8 248 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 DBNDD1Q9H9R9 158 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ANO10Q9NW15 660 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 SENP1Q9P0U3 644 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 DNPEPQ9ULA0 475 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 PLA2G4CQ9UP65 541 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 NTNG1Q9Y2I2 539 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 RNF115Q9Y4L5 304 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 SYNJ2O15056 1496 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ZMYM6O95789 1325 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 CFAP73A6NFT4 308 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SDC3O75056 442 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 TSC22D2O75157 780 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 STK17BO94768 372 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 ALPPP05187 535 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 ZCCHC18P0CG32 403 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SLC35E2P0CK97 266 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 CCDC192P0DO97 292 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 ALPPL2P10696 532 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 LAMP1P11279 417 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 PGAM2P15259 253 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 IDSP22304 550 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 GDF1P27539 372 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 PTPN4P29074 926 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SLC6A8P48029 635 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 NUMBP49757 651 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SLC25A1P53007 311 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 PAX2Q02962 417 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 WASHC5Q12768 1159 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 ZIC1Q15915 447 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 IL23RQ5VWK5 629 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 OR6B2Q6IFH4 312 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 PRR5LQ6MZQ0 368 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 CGB2Q6NT52 195 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 TATDN1Q6P1N9 297 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 GOLGA7Q7Z5G4 137 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 WDR36Q8NI36 951 aaKnown RBP2.48□□□□□ -2.01
TARDBP-208ENST00000477447 DLX4Q92988 240 aaPredicted RBP2.48□□□□□ -2.01
TARDBP-208ENST00000477447 C9orf85Q96MD7 179 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 NSMCE2Q96MF7 247 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 CLIP2Q9UDT6 1046 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SLC2A6Q9UGQ3 507 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 BCAP29Q9UHQ4 241 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 FZR1Q9UM11 496 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 RPH3AQ9Y2J0 694 aaPredicted RBP2.48□□□□□ -2.01
TARDBP-208ENST00000477447 PTPRUQ92729 1446 aa2.48□□□□□ -2.01
TARDBP-208ENST00000477447 SPAG9O60271 1321 aaKnown RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 A8MX80 341 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 PDLIM1O00151 329 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ADAM12O43184 909 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 GPAA1O43292 621 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 TYROBPO43914 113 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 LCMT2O60294 686 aaKnown RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 GJB5O95377 273 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 IGSF6O95976 241 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 GIG44P09565 113 aaPredicted RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 HOXB7P09629 217 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ALPIP09923 528 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 STMN1P16949 149 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 FASP25445 335 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 PRDX2P32119 198 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 CHRNA3P32297 505 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 MDH2P40926 338 aaKnown RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 POU3F4P49335 361 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 SRYQ05066 204 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 TGIF1Q15583 401 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 QRICH1Q2TAL8 776 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 ACSF3Q4G176 576 aaPredicted RBP2.47□□□□□ -2.01
TARDBP-208ENST00000477447 UTF1Q5T230 341 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 RAB12Q6IQ22 244 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 PNCKQ6P2M8 343 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 PAMR1Q6UXH9 720 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 P4HA3Q7Z4N8 544 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 C11orf53Q8IXP5 236 aa2.47□□□□□ -2.01
TARDBP-208ENST00000477447 Q8N9G6 341 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms