RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 PIGUQ9H490 435 aa21.53■■□□□ 1.04
CCDC7-206ENST00000476558 SOHLH2Q9NX45 425 aa21.53■■□□□ 1.04
CCDC7-206ENST00000476558 POFUT2Q9Y2G5 429 aa21.53■■□□□ 1.04
CCDC7-206ENST00000476558 CHST2Q9Y4C5 530 aa21.53■■□□□ 1.04
CCDC7-206ENST00000476558 GMPPBQ9Y5P6 360 aa21.53■■□□□ 1.04
CCDC7-206ENST00000476558 TRBV4-1A0A0J9YWV2 114 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 FCMRO60667 390 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 NT5EP21589 574 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 DHPSP49366 369 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 MAPK10P53779 464 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 RPP38P78345 283 aaKnown RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 FRRS1Q6ZNA5 592 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 HMGN2P46Q86SG4 172 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 HOXB13Q92826 284 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 ZNF566Q969W8 418 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 SPRTNQ9H040 489 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 HCN3Q9P1Z3 774 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 SLC9A8Q9Y2E8 581 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 CLDN16Q9Y5I7 305 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 TGFBR3LH3BV60 316 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 M0R3H8 397 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 HRO43593 1189 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 CTNSO60931 367 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 AGXTP21549 392 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 ARRB1P49407 418 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 MAP4K2Q12851 820 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 SRSF5Q13243 272 aaKnown RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 TOP3AQ13472 1001 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 DEF8Q6ZN54 512 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 DGAT2L6Q6ZPD8 337 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 ZNF595Q8IYB9 648 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 ADAMTS18Q8TE60 1221 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 SLC9A6Q92581 669 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 TMIGD2Q96BF3 282 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 AHCYL2Q96HN2 611 aaKnown RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 MTHFD2LQ9H903 347 aaPredicted RBP21.52■■□□□ 1.04
CCDC7-206ENST00000476558 PILRBQ9UKJ0 227 aa21.52■■□□□ 1.04
CCDC7-206ENST00000476558 ALPPP05187 535 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 H1F0P07305 194 aaKnown RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 GNSP15586 552 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 S1PR1P21453 382 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 ELAVL4P26378 380 aaKnown RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 PPM1FP49593 454 aaPredicted RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 GPLD1P80108 840 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 NPTX1Q15818 432 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 CNPY1Q3B7I2 92 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 ZNF311Q5JNZ3 666 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 MLIPQ5VWP3 458 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 ZNF773Q6PK81 442 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 DHRS4L2Q6PKH6 230 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 RBM44Q6ZP01 1051 aaKnown RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 PLXDC1Q8IUK5 500 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 PARP8Q8N3A8 854 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 CDRT4Q8N9R6 151 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 OR6T1Q8NGN1 323 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 DOK4Q8TEW6 326 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 SDF2Q99470 211 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 ARHGDIGQ99819 225 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 APOL4Q9BPW4 351 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 ADNPQ9H2P0 1102 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 DUSP22Q9NRW4 184 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 KLHL3Q9UH77 587 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 TMEM184BQ9Y519 407 aaPredicted RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 CABIN1Q9Y6J0 2220 aa21.51■■□□□ 1.03
CCDC7-206ENST00000476558 MN1Q10571 1320 aaPredicted RBP21.51■■□□□ 1.03
CCDC7-206ENST00000476558 CCDC159P0C7I6 412 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 CD1CP29017 333 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 PRKAR1BP31321 381 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 GABARAPL2P60520 117 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 IL5RAQ01344 420 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 SIGLEC14Q08ET2 396 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 SEC23BQ15437 767 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 AP1ARQ63HQ0 302 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 TYW3Q6IPR3 259 aaKnown RBP21.5■■□□□ 1.03
CCDC7-206ENST00000476558 VRK2Q86Y07 508 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 MAML2Q8IZL2 1156 aaPredicted RBP21.5■■□□□ 1.03
CCDC7-206ENST00000476558 GAB3Q8WWW8 586 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 PEX11GQ96HA9 241 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 STACQ99469 402 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 YIPF3Q9GZM5 350 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 CXorf21Q9HAI6 301 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 ADAP2Q9NPF8 381 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 SATB2Q9UPW6 733 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 PCDHGA6Q9Y5G7 932 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 A0A1W2PRQ8 180 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 H0YIG0 161 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 SLC1A7O00341 560 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 DUX1O43812 170 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 PCDHGA12O60330 932 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 OXSR1O95747 527 aaPredicted RBP21.5■■□□□ 1.03
CCDC7-206ENST00000476558 CBX7O95931 251 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 GASTP01350 101 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 CSF2RBP32927 897 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 SMIM11AP58511 58 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 CXCR4P61073 352 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 HSD11B2P80365 405 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 MAT1AQ00266 395 aaKnown RBP21.5■■□□□ 1.03
CCDC7-206ENST00000476558 PIN1Q13526 163 aaPredicted RBP21.5■■□□□ 1.03
CCDC7-206ENST00000476558 DGCR6Q14129 220 aa21.5■■□□□ 1.03
CCDC7-206ENST00000476558 KCNAB1Q14722 419 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms