RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 HMGN2P05204 90 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CPMP14384 443 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CD79BP40259 229 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ATP4BP51164 291 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PPP5CP53041 499 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 LCN6P62502 163 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FOXM1Q08050 763 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RPA4Q13156 261 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 EXOSC7Q15024 291 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 BAK1Q16611 211 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 BEX5Q5H9J7 111 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PARS2Q7L3T8 475 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TMED4Q7Z7H5 227 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM150AQ86TG1 271 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FAM219AQ8IW50 185 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ARL14Q8N4G2 192 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 OR52P1PQ8NH57 321 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SNX33Q8WV41 574 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 GEMIN6Q8WXD5 167 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NCSTNQ92542 709 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PIK3R3Q92569 461 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 IRF7Q92985 503 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 MUL1Q969V5 352 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PPP1R14BQ96C90 147 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZMYND19Q96E35 227 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF300Q96RE9 604 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TRIB3Q96RU7 358 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PPIL3Q9H2H8 161 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CCDC86Q9H6F5 360 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 AK6Q9Y3D8 172 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PEX16Q9Y5Y5 336 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF780BQ9Y6R6 833 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SPACA6W5XKT8 324 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SMG1Q96Q15 3661 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 AGAP5A6NIR3 686 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 UPK1AO00322 258 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 MID1O15344 667 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 FMO6PO60774 539 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SEC14L2O76054 403 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ANXA8P13928 327 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ITIH1P19827 911 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 PAX3P23760 479 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 GCGRP47871 477 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ANXA11P50995 505 aaKnown RBP4.71□□□□□ -1.66
CCDC39-204ENST00000476379 OR12D2P58182 307 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 PFN3P60673 137 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 TGM3Q08188 693 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 AMZ1Q400G9 498 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 TP53I3Q53FA7 332 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 HES5Q5TA89 166 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 REEP3Q6NUK4 255 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 CNIH2Q6PI25 160 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 GDPD3Q7L5L3 318 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 PRSS45Q7RTY3 260 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 LACC1Q8IV20 430 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 LYSMD2Q8IV50 215 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 CPOQ8IVL8 374 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 PRR22Q8IZ63 422 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 LSM14AQ8ND56 463 aaKnown RBP4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SIMC1Q8NDZ2 872 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 BBS1Q8NFJ9 593 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 OR52L1Q8NGH7 329 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 HAVCR2Q8TDQ0 301 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 OR8D1Q8WZ84 308 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SNAPC3Q92966 411 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SAMD8Q96LT4 415 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 KCTD7Q96MP8 289 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 OR4K3Q96R72 315 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 WFDC6Q9BQY6 131 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 LGR4Q9BXB1 951 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SLC29A3Q9BZD2 475 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 MED28Q9H204 178 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ABCG5Q9H222 651 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 IL21RQ9HBE5 538 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 NUDT15Q9NV35 164 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 STMN3Q9NZ72 180 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ACACBO00763 2458 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 CARNS1A5YM72 827 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ACOD1A6NK06 481 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 DRGXA6NNA5 263 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 DVL2O14641 736 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 PRKYO43930 277 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 GPX5O75715 221 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 IGLV3-25P01717 112 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 CLUP10909 449 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ASMTP46597 345 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 VSX2P58304 361 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF155Q12901 538 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SELENBP1Q13228 472 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 KCNAB1Q14722 419 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ATAD3CQ5T2N8 411 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 FAM46CQ5VWP2 391 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ATG9BQ674R7 924 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 ERICH5Q6P6B1 374 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 HACD2Q6Y1H2 254 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 LRRC70Q7Z2Q7 622 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 FAM9CQ8IZT9 166 aa4.71□□□□□ -1.66
CCDC39-204ENST00000476379 SCAIQ8N9R8 606 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms