RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SCN2BO60939 215 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 LDLRP01130 860 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 FBXO45P0C2W1 286 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 CCL3P10147 92 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 LBPP18428 481 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 DRD4P21917 467 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 IL12AP29459 219 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 MPIP34949 423 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 TDGF1P3P51864 188 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 SEC24CP53992 1094 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 CORO7P57737 925 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 SPATA19Q7Z5L4 167 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 SULF2Q8IWU5 870 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 OR2L13Q8N349 312 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 TMEM156Q8N614 296 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 OR10G3Q8NGC4 313 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 OR4N2Q8NGD1 307 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 ASB15Q8WXK1 588 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 TP53INP1Q96A56 240 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 PPCDCQ96CD2 204 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 GIMAP5Q96F15 307 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 MARK4Q96L34 752 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 RILPQ96NA2 401 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 FRMD6Q96NE9 622 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 EBF4Q9BQW3 602 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 FOLH1BQ9HBA9 442 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 NPHS2Q9NP85 383 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 GIMAP4Q9NUV9 329 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 NOP53Q9NZM5 478 aaKnown RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 ABI3Q9P2A4 366 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 C19orf53Q9UNZ5 99 aaPredicted RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 EIF3LQ9Y262 564 aaKnown RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 SLC5A6Q9Y289 635 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 GPR55Q9Y2T6 319 aaPredicted RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 GPR45Q9Y5Y3 372 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 COPG1Q9Y678 874 aaKnown RBP12.08□□□□□ -0.48
TPM3-216ENST00000473036 FBN2P35556 2912 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 FREM3P0C091 2139 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 A0A087WV62 115 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 A0A0G2JND7 137 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 A8MVJ9 347 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 C9JVG2 144 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CDK2AP1O14519 115 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 SNX3O60493 162 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CCDC22O60826 627 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 C1QCP02747 245 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CD46P15529 392 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CD1EP15812 388 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 RFC3P40938 356 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 ZFP36L2P47974 494 aaKnown RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 NME5P56597 212 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 FBXW4P57775 412 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 GPR85P60893 370 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 UFM1P61960 85 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 HSPB3Q12988 150 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 MRPL49Q13405 166 aaKnown RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 MAPKAPK3Q16644 382 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 BICRALQ6AI39 1079 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 OTOGQ6ZRI0 2925 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CAMKMTQ7Z624 323 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 PIGWQ7Z7B1 504 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 SAMD14Q8IZD0 417 aaPredicted RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 PSD4Q8NDX1 1056 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 C17orf47Q8NEP4 570 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 BCAS4Q8TDM0 211 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 FAR1Q8WVX9 515 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 NTNG2Q96CW9 530 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 ERP27Q96DN0 273 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 SPACA9Q96E40 222 aaPredicted RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 MAGED4Q96JG8 741 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 C5orf34Q96MH7 638 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 ELAC2Q9BQ52 826 aaKnown RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 SLX1AQ9BQ83 275 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 RABEP2Q9H5N1 569 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 TCF7L2Q9NQB0 619 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPM3-216ENST00000473036 AIG1Q9NVV5 245 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 TMEM45AQ9NWC5 275 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 HPF1Q9NWY4 346 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 NTMQ9P121 344 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 ARL2BPQ9Y2Y0 163 aa12.07□□□□□ -0.48
TPM3-216ENST00000473036 CHCHD2Q9Y6H1 151 aaPredicted RBP12.07□□□□□ -0.48
TPM3-216ENST00000473036 CACNA1DQ01668 2161 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 A1L4Q6 167 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 ADAM10O14672 748 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 ZNHIT1O43257 154 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 PEX1O43933 1283 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 DCTN3O75935 186 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 RASAL1O95294 804 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 CBX6O95503 412 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 CLDN1O95832 211 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 RNF224P0DH78 156 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms