RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GPR37L1O60883 481 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DBHP09172 617 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TAP2Q03519 686 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TXNRD3NBQ6F5E7 133 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TAAR8Q969N4 342 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM71F1Q96KD3 344 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CRB3Q9BUF7 120 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 EEF1E1-BLOC1S5C9J1V9 151 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TCAPO15273 167 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FMO6PO60774 539 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TSPAN15O95858 294 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RNH1P13489 461 aaKnown RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR51D1Q8NGF3 324 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF641Q96N77 438 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C7orf50Q9BRJ6 194 aaKnown RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NAALAD2Q9Y3Q0 740 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RNASE10Q5GAN6 216 aaKnown RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FBXL16Q8N461 479 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TSGA13Q96PP4 275 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UHRF1Q96T88 793 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SFXN1Q9H9B4 322 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTPRMP28827 1452 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RAB35Q15286 201 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR5L2Q8NGL0 311 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZDHHC1Q8WTX9 485 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM46AQ96IP4 442 aaKnown RBP12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SULT4A1Q9BR01 284 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 REEP4Q9H6H4 257 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FKRPQ9H9S5 495 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SNAPC5O75971 98 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PYCR1P32322 319 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC18A1P54219 525 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PLEKHG7Q6ZR37 379 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RABEPKQ7Z6M1 372 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SFXN2Q96NB2 322 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PCDHGB6Q9Y5F9 930 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LMAN2Q12907 356 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DHCR24Q15392 516 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ACSBG2Q5FVE4 666 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM122CQ6P4D5 195 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LRRN3E7EW58 273 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LYPLA2O95372 231 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 VNN1O95497 513 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 F10P00742 488 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ALDOBP05062 364 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TM4SF1P30408 202 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PPP1R3AQ16821 1122 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LRRC25Q8N386 305 aaPredicted RBP12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C5AR2Q9P296 337 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GSK3BP49841 420 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TBPL1P62380 186 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CES4AQ5XG92 561 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MEX3BQ6ZN04 569 aaKnown RBP12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM122AQ96E09 287 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FBXL20Q96IG2 436 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTRH2Q9Y3E5 179 aaKnown RBP12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC19A2O60779 497 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PRDX6P30041 224 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 HES1Q14469 280 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IER5LQ5T953 404 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C22orf42Q6IC83 251 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SALL4Q9UJQ4 1053 aa12.62□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MELKQ14680 651 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KLBQ86Z14 1044 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TUSC5Q8IXB3 177 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PIAS3Q9Y6X2 628 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPW3 197 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TMEM63AO94886 807 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SEMA4FO95754 770 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 APOA2P02652 100 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 HSD17B7P56937 341 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C3P1Q6ZMU1 363 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR51T1Q8NGJ9 327 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KLHL13Q9P2N7 655 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms