RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ZNF780BQ9Y6R6 833 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 NF1P21359 2839 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 FAM221AA4D161 298 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 CD8B2A6NJW9 211 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 ACOX3O15254 700 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 ESRRBO95718 433 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 IL2RAP01589 272 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 SLCO1A2P46721 670 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 CSTF3Q12996 717 aaKnown RBP22.3■■□□□ 1.16
PTCH1-210ENST00000468211 RASA2Q15283 850 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 GLE1Q53GS7 698 aaKnown RBP22.3■■□□□ 1.16
PTCH1-210ENST00000468211 GPRIN3Q6ZVF9 776 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 MNS1Q8NEH6 495 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 KAT2AQ92830 837 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 TMBIM1Q969X1 311 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 APIPQ96GX9 242 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 FETUBQ9UGM5 382 aa22.3■■□□□ 1.16
PTCH1-210ENST00000468211 GPR55Q9Y2T6 319 aaPredicted RBP22.3■■□□□ 1.16
PTCH1-210ENST00000468211 MBD3L4A6NDZ8 208 aaPredicted RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 MBD3L3A6NE82 208 aaPredicted RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 MBD3L5A6NJ08 208 aaPredicted RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 TO15178 435 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 CDH16O75309 829 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 KRT6AP02538 564 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 KRT6BP04259 564 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 ABHD2P08910 425 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 HSD3B1P14060 373 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 CD1EP15812 388 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 TAC1P20366 129 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 HSD3B2P26439 372 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 KRT6CP48668 564 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 HMGCS1Q01581 520 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 PLXDC2Q6UX71 529 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 C9orf106Q8NAJ2 232 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 OR9A2Q8NGT5 310 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 MBD3L2Q8NHZ7 208 aaPredicted RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 RDH11Q8TC12 318 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 METTL6Q8TCB7 284 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 ZNF675Q8TD23 568 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 EXOSC8Q96B26 276 aaKnown RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 KCNA7Q96RP8 456 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 RASSF1Q9NS23 344 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 KLRF1Q9NZS2 232 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 PRODH2Q9UF12 536 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 EXO1Q9UQ84 846 aaKnown RBP22.29■■□□□ 1.16
PTCH1-210ENST00000468211 PCNX3Q9H6A9 2034 aa22.29■■□□□ 1.16
PTCH1-210ENST00000468211 PRAMEF25A6NGN4 478 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 FRG2CA6NGY1 282 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 GOLGA8RI6L899 631 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 PCDH7O60245 1069 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CT45A8P0DMV1 189 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CT45A9P0DMV2 189 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 IMPDH1P20839 514 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CORO7P57737 925 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 DCAF7P61962 342 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 SNTA1Q13424 505 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 FLYWCH1Q4VC44 716 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CT45A2Q5DJT8 189 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 SCIMPQ6UWF3 145 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CLEC4MQ9H2X3 399 aaPredicted RBP22.28■■□□□ 1.16
PTCH1-210ENST00000468211 PFDN4Q9NQP4 134 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CCM2LQ9NUG4 571 aaPredicted RBP22.28■■□□□ 1.16
PTCH1-210ENST00000468211 CBLCQ9ULV8 474 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 TIMM22Q9Y584 194 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 ABCA4P78363 2273 aa22.28■■□□□ 1.16
PTCH1-210ENST00000468211 B4DXG7 233 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 RIPK2O43353 540 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 ULK1O75385 1050 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 ACTL6AO96019 429 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 RHOXF2BP0C7M4 288 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 ATP5F1P24539 256 aaPredicted RBP22.27■■□□□ 1.16
PTCH1-210ENST00000468211 HMOX2P30519 316 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 PRKAA2P54646 552 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 PRSS53Q2L4Q9 553 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 LGSNQ5TDP6 509 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 NPSR1Q6W5P4 371 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 C16orf78Q8WTQ4 265 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 MTBPQ96DY7 904 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 C11orf24Q96F05 449 aaPredicted RBP22.27■■□□□ 1.16
PTCH1-210ENST00000468211 COL21A1Q96P44 957 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 BTBD9Q96Q07 612 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 TUBA1CQ9BQE3 449 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 EBPLQ9BY08 206 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 OR2B2Q9GZK3 357 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 CALHM2Q9HA72 323 aa22.27■■□□□ 1.16
PTCH1-210ENST00000468211 GNG14A0A1W2PPG7 69 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 OR6C70A6NIJ9 312 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 A6NNC1 897 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 C17orf51A8MQB3 221 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 REM1O75628 298 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 FAM153BP0C7A2 387 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 DRD2P14416 443 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 CPN1P15169 458 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 TACR1P25103 407 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 CTSSP25774 331 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 FOXF2Q12947 444 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 SF3B4Q15427 424 aaKnown RBP eCLIP22.26■■□□□ 1.15
PTCH1-210ENST00000468211 FAM153CQ494X1 144 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 TRIM42Q8IWZ5 723 aa22.26■■□□□ 1.15
PTCH1-210ENST00000468211 ZPLD1Q8TCW7 415 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms