RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PCDHGB3Q9Y5G1 929 aa23.66■■□□□ 1.38
U2AF1-206ENST00000464750 TO15178 435 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 UGT2B11O75310 529 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 HPNP05981 417 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 HOXD4P09016 255 aaPredicted RBP23.65■■□□□ 1.38
U2AF1-206ENST00000464750 IGFBP2P18065 325 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 DRD5P21918 477 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 MSX1P28360 303 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 ADH7P40394 386 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 ZFP36L2P47974 494 aaKnown RBP23.65■■□□□ 1.38
U2AF1-206ENST00000464750 CRYZQ08257 329 aaKnown RBP23.65■■□□□ 1.38
U2AF1-206ENST00000464750 CEBPEQ15744 281 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 ERCC6LQ2NKX8 1250 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 TMEM81Q6P7N7 255 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 ANGPTL8Q6UXH0 198 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 FAM9CQ8IZT9 166 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 NTNG2Q96CW9 530 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 C14orf79Q96F83 325 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 SHCBP1LQ9BZQ2 653 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 SENP1Q9P0U3 644 aa23.65■■□□□ 1.38
U2AF1-206ENST00000464750 POLR3HQ9Y535 204 aaPredicted RBP23.65■■□□□ 1.38
U2AF1-206ENST00000464750 CSMD2Q7Z408 3487 aa23.64■■□□□ 1.38
U2AF1-206ENST00000464750 DDCP20711 480 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 ELAVL4P26378 380 aaKnown RBP23.64■■□□□ 1.37
U2AF1-206ENST00000464750 PTPN6P29350 595 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 TOMM20Q15388 145 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 LIPMQ5VYY2 423 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 TIGD3Q6B0B8 471 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 TRIM46Q7Z4K8 759 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 BTBD9Q96Q07 612 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 ANKZF1Q9H8Y5 726 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 KLRF1Q9NZS2 232 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 MID2Q9UJV3 735 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 GPR55Q9Y2T6 319 aaPredicted RBP23.64■■□□□ 1.37
U2AF1-206ENST00000464750 PDZD2O15018 2839 aa23.64■■□□□ 1.37
U2AF1-206ENST00000464750 PRAMEF25A6NGN4 478 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 FAM47E-STBD1D6RA91 191 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 SNPHO15079 494 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 NME6O75414 186 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-206ENST00000464750 RSL1D1O76021 490 aaKnown RBP23.63■■□□□ 1.37
U2AF1-206ENST00000464750 PTGDSP41222 190 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 SLC18A2Q05940 514 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 C2orf80Q0P641 193 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 RIPPLY2Q5TAB7 128 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 SLC30A6Q6NXT4 461 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 OR1J4Q8NGS1 313 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 TMBIM1Q969X1 311 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 VSTM2LQ96N03 204 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 BBS4Q96RK4 519 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 GALNT9Q9HCQ5 603 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 MYNNQ9NPC7 610 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 MIEF1Q9NQG6 463 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 RRAGDQ9NQL2 400 aaPredicted RBP23.63■■□□□ 1.37
U2AF1-206ENST00000464750 SLC6A5Q9Y345 797 aa23.63■■□□□ 1.37
U2AF1-206ENST00000464750 POLQO75417 2590 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 ICOSLGO75144 302 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 MPIP34949 423 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 CORO7P57737 925 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 TLE4Q04727 773 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 SNTA1Q13424 505 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 EIPR1Q53HC9 387 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 C10orf107Q8IVU9 208 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 OR7G2Q8NG99 324 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 OR2W6PQ8NHA6 318 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 COL21A1Q96P44 957 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 FOLH1BQ9HBA9 442 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 MED12Q93074 2177 aa23.62■■□□□ 1.37
U2AF1-206ENST00000464750 C2orf72A6NCS6 295 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 OR6C70A6NIJ9 312 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 MYO1GB0I1T2 1018 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 PLOD3O60568 738 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 ERN1O75460 977 aaKnown RBP23.61■■□□□ 1.37
U2AF1-206ENST00000464750 REM1O75628 298 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 CT45A8P0DMV1 189 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 CT45A9P0DMV2 189 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 UROSP10746 265 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 PCLAFQ15004 111 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 PRSS53Q2L4Q9 553 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 ACSF3Q4G176 576 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-206ENST00000464750 CT45A2Q5DJT8 189 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 WIPI1Q5MNZ9 446 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-206ENST00000464750 CLEC6AQ6EIG7 209 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 FAM71E1Q6IPT2 247 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 NPSR1Q6W5P4 371 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 SEM1Q6ZVN7 128 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 LIX1LQ8IVB5 337 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 FAM76AQ8TAV0 307 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.61■■□□□ 1.37
U2AF1-206ENST00000464750 SLC35A4Q96G79 324 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 TIMP4Q99727 224 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 STMN4Q9H169 189 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-206ENST00000464750 MAPRE3Q9UPY8 281 aa23.61■■□□□ 1.37
U2AF1-206ENST00000464750 TLDC2A0PJX2 215 aa23.6■■□□□ 1.37
U2AF1-206ENST00000464750 JUNP05412 331 aaKnown RBP23.6■■□□□ 1.37
U2AF1-206ENST00000464750 NCBP2P52298 156 aaKnown RBP eCLIP23.6■■□□□ 1.37
U2AF1-206ENST00000464750 ZNF155Q12901 538 aaPredicted RBP23.6■■□□□ 1.37
U2AF1-206ENST00000464750 VASNQ6EMK4 673 aa23.6■■□□□ 1.37
U2AF1-206ENST00000464750 NOXRED1Q6NXP6 359 aa23.6■■□□□ 1.37
U2AF1-206ENST00000464750 FAM83FQ8NEG4 500 aaPredicted RBP23.6■■□□□ 1.37
U2AF1-206ENST00000464750 TMCO6Q96DC7 493 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms