RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 HGDQ93099 445 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 TMBIM1Q969X1 311 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 EXOSC8Q96B26 276 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 COL21A1Q96P44 957 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 NTMT1Q9BV86 223 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 ZBTB26Q9HCK0 441 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 GIMAP4Q9NUV9 329 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 UTS2RQ9UKP6 389 aa11.22□□□□□ -0.61
RPA3-206ENST00000463632 EXO1Q9UQ84 846 aaKnown RBP11.22□□□□□ -0.61
RPA3-206ENST00000463632 MED13LQ71F56 2210 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.61
RPA3-206ENST00000463632 GNG14A0A1W2PPG7 69 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SH3D21A4FU49 640 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 IL18BPO95998 194 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 ATP1B1P05026 303 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 S1PR1P21453 382 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 PPICP45877 212 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SERPINB9P50453 376 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SORDQ00796 357 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SNTA1Q13424 505 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SH2D4BQ5SQS7 431 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 LETMD1Q6P1Q0 360 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 CCDC116Q8IYX3 515 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 CDYL2Q8N8U2 506 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 SIMC1Q8NDZ2 872 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 WFDC11Q8NEX6 87 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 OR4K17Q8NGC6 315 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 KAT2AQ92830 837 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 TM4SF18Q96CE8 201 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 FAM111AQ96PZ2 611 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 ADOQ96SZ5 270 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 MRPL57Q9BQC6 102 aaKnown RBP11.21□□□□□ -0.61
RPA3-206ENST00000463632 LRRC1Q9BTT6 524 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 ACBD3Q9H3P7 528 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 ACSS3Q9H6R3 686 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 ANKRA2Q9H9E1 313 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 GALNT8Q9NY28 637 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 OR10H1Q9Y4A9 318 aa11.21□□□□□ -0.61
RPA3-206ENST00000463632 FRG2CA6NGY1 282 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 PLOD2O00469 737 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 PPP6CO00743 305 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 NME6O75414 186 aaPredicted RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 SUPT7LO94864 414 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 OR4F21O95013 312 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 ATE1O95260 518 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 CBX7O95931 251 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 KRT6AP02538 564 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 KRT6BP04259 564 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 RHOXF2BP0C7M4 288 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 CPN1P15169 458 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 TAC1P20366 129 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 DRD5P21918 477 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 HMOX2P30519 316 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 SLCO1A2P46721 670 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 KCNJ5P48544 419 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 KRT6CP48668 564 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 ETF1P62495 437 aaKnown RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 BTKQ06187 659 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 UBAP2Q5T6F2 1119 aaKnown RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 PPP4R4Q6NUP7 873 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 LARP4Q71RC2 724 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPA3-206ENST00000463632 PLCZ1Q86YW0 608 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 P3H2Q8IVL5 708 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 UBQLNLQ8IYU4 475 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 WNT2BQ93097 391 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 ISL2Q96A47 359 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 ZFP3Q96NJ6 502 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 DACH2Q96NX9 599 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 MRPL46Q9H2W6 279 aaKnown RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 PIGMQ9H3S5 423 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 ZNF395Q9H8N7 513 aaPredicted RBP11.2□□□□□ -0.62
RPA3-206ENST00000463632 VPS29Q9UBQ0 182 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 CES1P1Q9UKY3 287 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 DLGAP4Q9Y2H0 992 aa11.2□□□□□ -0.62
RPA3-206ENST00000463632 TRIM49D1C9J1S8 452 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 MANBAO00462 879 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 SCO2O43819 266 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 PCDH7O60245 1069 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 BCAS2O75934 225 aaPredicted RBP11.19□□□□□ -0.62
RPA3-206ENST00000463632 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
RPA3-206ENST00000463632 RCBTB2O95199 551 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 IL3P08700 152 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 COL6A2P12110 1019 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 FOSL1P15407 271 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 DPP4P27487 766 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 SRD5A2P31213 254 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 SOX18P35713 384 aa11.19□□□□□ -0.62
RPA3-206ENST00000463632 PTGDSP41222 190 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms