RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UCK2Q9BZX2 261 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 SYNPO2LQ9H987 977 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 ANKRA2Q9H9E1 313 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 A3GALT2U3KPV4 340 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 A0A1B0GVC2 190 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 A0A1W2PQL4 384 aaPredicted RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 A6NIN4 97 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 NOTOA8MTQ0 251 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ANHXE9PGG2 379 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 NARSO43776 548 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 RHCEP18577 417 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 AK4P27144 223 aaPredicted RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ACSL1P33121 698 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SOX18P35713 384 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 RPS21P63220 83 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PSPHP78330 225 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ACSM5Q6NUN0 579 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PHC2Q8IXK0 858 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 FLCNQ8NFG4 579 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 GOT1L1Q8NHS2 421 aaPredicted RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 APOBEC4Q8WW27 367 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 GATAD2BQ8WXI9 593 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 METTL2AQ96IZ6 378 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 CITED4Q96RK1 184 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SPATA9Q9BWV2 254 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF717Q9BY31 904 aaPredicted RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PLA2G12AQ9BZM1 189 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 RACGAP1Q9H0H5 632 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SERHL2Q9H4I8 314 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PHPT1Q9NRX4 125 aaPredicted RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 IL20RAQ9UHF4 553 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ANGPT4Q9Y264 503 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 CLCA3PQ9Y6N3 262 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PLA2G10O15496 165 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 FRS3O43559 492 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 OR1F1O43749 312 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 CPNE3O75131 537 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PCSK2P16519 638 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 APEX1P27695 318 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SDC2P34741 201 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ETV6P41212 452 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 KIR2DL3P43628 341 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 RPA4Q13156 261 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 LCTLQ6UWM7 567 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 USP30Q70CQ3 517 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SLC9B2Q86UD5 537 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SETD7Q8WTS6 366 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 TM9SF4Q92544 642 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PIK3R3Q92569 461 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 CLIP3Q96DZ5 547 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 PDXPQ96GD0 296 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 MAPKAP1Q9BPZ7 522 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 BTBD1Q9H0C5 482 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 POLR2J3Q9H1A7 115 aaKnown RBP11.69□□□□□ -0.54
LINC00959-201ENST00000456581 TMEM38AQ9H6F2 299 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 SEMA3GQ9NS98 782 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 MUC3AQ02505 3323 aa11.69□□□□□ -0.54
LINC00959-201ENST00000456581 A0A1W2PS29 197 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 C5orf58C9J3I9 102 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CSF3P09919 207 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 HMGA2P52926 109 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 HTR4Q13639 388 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PDE7AQ13946 482 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 LARS2Q15031 903 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 P2RY14Q15391 338 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 RAB30Q15771 203 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF630Q2M218 657 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 REEP3Q6NUK4 255 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF544Q6NX49 715 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 DGLUCYQ7Z3D6 616 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 KRT78Q8N1N4 520 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TMEM80Q96HE8 168 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 DIRAS2Q96HU8 199 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 GDF15Q99988 308 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 AICDAQ9GZX7 198 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 EGLN3Q9H6Z9 239 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 LHX9Q9NQ69 397 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TXNL4BQ9NX01 149 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SPHK1Q9NYA1 384 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SPIN1Q9Y657 262 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 DSPPQ9NZW4 1301 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CENPXA8MT69 81 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PLRG1O43660 514 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 OR12D1P0DN82 309 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ERGP11308 486 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 IFI30P13284 250 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 OSMP13725 252 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PSMA1P25786 263 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 RORCP51449 518 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 MANFP55145 182 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CDK10Q15131 360 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF750Q32MQ0 723 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms