RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 PCDHA9Q9Y5H5 950 aa10.62□□□□□ -0.71
GARNL3-210ENST00000453030 A0A1B0GTL3 188 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ACOX3O15254 700 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 SMIM24O75264 130 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NME6O75414 186 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ATP1B1P05026 303 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 FOSL1P15407 271 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 PCSK2P16519 638 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NAGAP17050 411 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TSPAN8P19075 237 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 CSNK2A2P19784 350 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ADSLP30566 484 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 SLC7A5Q01650 507 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 GUCY2DQ02846 1103 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 LTBQ06643 244 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 MGAT2Q10469 447 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 GALNT1Q10472 559 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 LETMD1Q6P1Q0 360 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 METTL2BQ6P1Q9 378 aaKnown RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TMEM81Q6P7N7 255 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ENPP6Q6UWR7 440 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NUP54Q7Z3B4 507 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 BIVMQ86UB2 503 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 KRTAP1-3Q8IUG1 177 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 GRAMD2AQ8IUY3 354 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TRIM42Q8IWZ5 723 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 WDSUB1Q8N9V3 476 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 SELENOMQ8WWX9 145 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TMBIM1Q969X1 311 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NTNG2Q96CW9 530 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ZFP3Q96NJ6 502 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TM9SF2Q99805 663 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 G6PC3Q9BUM1 346 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NTMT1Q9BV86 223 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 ANKRA2Q9H9E1 313 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 NEUROD4Q9HD90 331 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 TAS2R10Q9NYW0 307 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 CLCF1Q9UBD9 225 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 FBXL2Q9UKC9 423 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 CES1P1Q9UKY3 287 aa10.61□□□□□ -0.71
GARNL3-210ENST00000453030 EXO1Q9UQ84 846 aaKnown RBP10.61□□□□□ -0.71
GARNL3-210ENST00000453030 STX16-NPEPL1H3BU86 382 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 PLOD2O00469 737 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 STX16O14662 325 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 GUCY1B2O75343 617 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 REM1O75628 298 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 RCBTB2O95199 551 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 GOSR1O95249 250 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 ESRRBO95718 433 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 PDYNP01213 254 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 RPS17P08708 135 aaKnown RBP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 CPN1P15169 458 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 CD53P19397 219 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 HOXC12P31275 282 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 PHBP35232 272 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 STARP49675 285 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 MAP4K2Q12851 820 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 SNTA1Q13424 505 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 GGTA1PQ4G0N0 100 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 C10orf62Q5T681 223 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 OR5M10Q6IEU7 315 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 MILR1Q7Z6M3 343 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 C1orf52Q8N6N3 182 aaKnown RBP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 TM4SF18Q96CE8 201 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 CNRIP1Q96F85 164 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 C18orf12Q96KH6 178 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 SFXN2Q96NB2 322 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 DACH2Q96NX9 599 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 COL21A1Q96P44 957 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 ACSS3Q9H6R3 686 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 NINJ2Q9NZG7 142 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 PRODH2Q9UF12 536 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 ZNF639Q9UID6 485 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 DKKL1Q9UK85 242 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 WIF1Q9Y5W5 379 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 ZNF780BQ9Y6R6 833 aa10.6□□□□□ -0.71
GARNL3-210ENST00000453030 RAI1Q7Z5J4 1906 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-210ENST00000453030 FRG2CA6NGY1 282 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 C17orf51A8MQB3 221 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PPP6CO00743 305 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CBR3O75828 277 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 OTCP00480 354 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 INHBAP08476 426 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 RBP1P09455 135 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 INHBBP09529 407 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 IL12BP29460 328 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CASQ1P31415 396 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 MAGEA12P43365 314 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PPICP45877 212 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 EMDP50402 254 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 LHX2P50458 406 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CDH13P55290 713 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 GFRA1P56159 465 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CORO7P57737 925 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 NKX6-1P78426 367 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 HMGCS1Q01581 520 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms