RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF699Q32M78 642 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 PRAMEF20Q5VT98 475 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 C1orf189Q5VU69 101 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM207Q6UWW9 146 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ANGPTL8Q6UXH0 198 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 Q6ZRG5 221 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 SH2D5Q6ZV89 423 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 P4HA3Q7Z4N8 544 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ITIH5Q86UX2 942 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM228AQ86W67 206 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 KIRREL3Q8IZU9 778 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRRC75A-AS1Q8N1F1 130 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 KBTBD8Q8NFY9 601 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR5AU1Q8NGC0 362 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR2T11Q8NH01 316 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR52J3Q8NH60 311 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 C8orf46Q8TAG6 207 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM143Q96AN5 459 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 RASD2Q96D21 266 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM43Q9BTV4 400 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ELOVL3Q9HB03 270 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 LPAR2Q9HBW0 351 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 MED17Q9NVC6 651 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM181Q9P2C4 612 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF346Q9UL40 294 aaKnown RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 GRID1Q9ULK0 1009 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLC6A5Q9Y345 797 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 TTC41PQ6P2S7 1318 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 CARMIL1Q5VZK9 1371 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 NUP160Q12769 1436 aa3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 PRG4Q92954 1404 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P48-201ENST00000446155 PTPRMP28827 1452 aa3.84□□□□□ -1.8
HMGB1P48-201ENST00000446155 DNMBPQ6XZF7 1577 aa3.84□□□□□ -1.8
HMGB1P48-201ENST00000446155 A0A087WUV0 522 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM240BA0A1B0GVZ2 78 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 PCP4L1A6NKN8 68 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR52A4PA6NMU1 304 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 H0YL77 283 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 L7N2F9 121 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF264O43296 627 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 KIAA0513O60268 411 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 CACNG3O60359 315 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 KHDRBS3O75525 346 aaKnown RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 ANXA9O76027 345 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 FGF19O95750 216 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 LYNP07948 512 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 FGF4P08620 206 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 GSTT2P0CG29 244 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 GSTT2BP0CG30 244 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 CPN1P15169 458 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 RFC4P35249 363 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 SGSHP51688 502 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 NDST1P52848 882 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 PRMT2P55345 433 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 BTG1P62324 171 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 SRYQ05066 204 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 NCBP1Q09161 790 aaKnown RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 PPP1R7Q15435 360 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 CCDC6Q16204 474 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 CDKN3Q16667 212 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 HKDC1Q2TB90 917 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 C1orf185Q5T7R7 199 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 ARMC12Q5T9G4 340 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 DDI2Q5TDH0 399 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 TMEM225Q6GV28 225 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZSCAN25Q6NSZ9 544 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 C16orf62Q7Z3J2 963 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 VSTM4Q8IW00 320 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 UBE2J2Q8N2K1 259 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 MARVELD2Q8N4S9 558 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 NECAB1Q8N987 351 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 NFAM1Q8NET5 270 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR4C3Q8NH37 302 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR1L3Q8NH93 324 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 MRPL24Q96A35 216 aaKnown RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 NPY6RQ99463 290 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 OMDQ99983 421 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 DHX33Q9H6R0 707 aaKnown RBP3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 KCNK13Q9HB14 408 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 C3orf14Q9HBI5 128 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM114A2Q9NRY5 505 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 STARD5Q9NSY2 213 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 PSME2Q9UL46 239 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 FZR1Q9UM11 496 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 STK36Q9NRP7 1315 aa3.83□□□□□ -1.8
HMGB1P48-201ENST00000446155 PCF11O94913 1555 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 KANK1Q14678 1352 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ARPC4-TTLL3A0A0A6YYG9 625 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 PPIAL4CA0A0B4J2A2 164 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ARHGEF35A5YM69 484 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 METTL21EPA6NDL7 271 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ERICH4A6NGS2 130 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 MSGN1A6NI15 193 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 NKX6-3A6NJ46 265 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ANHXE9PGG2 379 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 LMO7DNF2Z398 122 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 DNALI1O14645 258 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ALOX15BO15296 676 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms