RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 THADAQ6YHU6 1953 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 A0A0J9YVX5 310 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 SPTY2D1-AS1A0A0U1RR47 76 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 A0A1W2PR77 199 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 SH3PXD2BA1X283 911 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 M0R3G1 203 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 ALPPP05187 535 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 CHRM4P08173 479 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 CTSEP14091 401 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 ALOX12P18054 663 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 GSTM3P21266 225 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 IFNGR2P38484 337 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 MC3RP41968 323 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 SERPINB10P48595 397 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 MASP1P48740 699 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 MAN2A2P49641 1150 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 SNRPGP62308 76 aaKnown RBP12.04□□□□□ -0.48
DDX56-204ENST00000431640 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
DDX56-204ENST00000431640 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 OR9A2Q8NGT5 310 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 OR10G6Q8NH81 332 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 BAHD1Q8TBE0 780 aaPredicted RBP12.04□□□□□ -0.48
DDX56-204ENST00000431640 C16orf58Q96GQ5 468 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 SPACA7Q96KW9 195 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 PRRC1Q96M27 445 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 YIPF4Q9BSR8 244 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 FUZQ9BT04 418 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
DDX56-204ENST00000431640 HRASLS2Q9NWW9 162 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 REV1Q9UBZ9 1251 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 NDOR1Q9UHB4 597 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 IFT52Q9Y366 437 aa12.04□□□□□ -0.48
DDX56-204ENST00000431640 MDC1Q14676 2089 aaKnown RBP12.04□□□□□ -0.48
DDX56-204ENST00000431640 A0A0J9YY10 115 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 CTSVO60911 334 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 CNOT3O75175 753 aaKnown RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 IFI6P09912 130 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 SP9P0CG40 484 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 PORP16435 677 aaPredicted RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 ENTPD1P49961 510 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 MAPK10P53779 464 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 RAB15P59190 212 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 OLR1P78380 273 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 OCA2Q04671 838 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 DUSP2Q05923 314 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 BNIP3Q12983 259 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 RUNX2Q13950 521 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 DGUOKQ16854 277 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 FAM214AQ32MH5 1076 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 SLX4IPQ5VYV7 408 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 PMS2CLQ68D20 193 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 CDC73Q6P1J9 531 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 CASP12Q6UXS9 341 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 C16orf62Q7Z3J2 963 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 TAF8Q7Z7C8 310 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 TRIM73Q86UV7 250 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 OOSP2Q86WS3 158 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 RBM45Q8IUH3 476 aaKnown RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 CCDC103Q8IW40 242 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 OR4D11Q8NGI4 311 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 SLC38A4Q969I6 547 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 MS4A4EQ96PG1 132 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 RSPO3Q9BXY4 272 aaPredicted RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 ANKRD19PQ9H560 264 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 MTHFD2LQ9H903 347 aaPredicted RBP12.03□□□□□ -0.48
DDX56-204ENST00000431640 SYNPO2LQ9H987 977 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 SLC22A7Q9Y694 548 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
DDX56-204ENST00000431640 FANCMQ8IYD8 2048 aa12.02□□□□□ -0.48
DDX56-204ENST00000431640 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 H0YGG7 62 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 TLR4O00206 839 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 NME6O75414 186 aaPredicted RBP12.02□□□□□ -0.49
DDX56-204ENST00000431640 SOX30O94993 753 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 THEGLP0DJG4 465 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 ALPPL2P10696 532 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 PIPP12273 146 aaPredicted RBP12.02□□□□□ -0.49
DDX56-204ENST00000431640 CD27P26842 260 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 POU1F1P28069 291 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 PRKAR1BP31321 381 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 CNR2P34972 360 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 GSSP48637 474 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 EMP3P54852 163 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 ARF3P61204 181 aaPredicted RBP12.02□□□□□ -0.49
DDX56-204ENST00000431640 FUT5Q11128 374 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 TARDBPQ13148 414 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX56-204ENST00000431640 PIN1Q13526 163 aaPredicted RBP12.02□□□□□ -0.49
DDX56-204ENST00000431640 SPCS2Q15005 226 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 SEC23BQ15437 767 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 TCEA2Q15560 299 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 DEFB134Q4QY38 66 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 HEPHL1Q6MZM0 1159 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms