RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ANKRD33Q7Z3H0 272 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ARHGAP22Q7Z5H3 698 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 C1QL2Q7Z5L3 287 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 TMPRSS12Q86WS5 348 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SFR1Q86XK3 245 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PLD3Q8IV08 490 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MFSD6LQ8IWD5 586 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 UEVLDQ8IX04 471 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SELENOHQ8IZQ5 122 aaKnown RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM123Q8N131 208 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 TEX26Q8N6G2 289 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LINC01465Q8N7H1 131 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 BMPERQ8N8U9 685 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CNBD1Q8NA66 436 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SMYD1Q8NB12 490 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 RNF149Q8NC42 400 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PPFIBP2Q8ND30 876 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DDHD1Q8NEL9 900 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ABHD11Q8NFV4 315 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 OR51L1Q8NGJ5 315 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CACNG8Q8WXS5 425 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DNAAF4Q8WXU2 420 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 WBP2Q969T9 261 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PPP1R14BQ96C90 147 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 OPTNQ96CV9 577 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ECHDC3Q96DC8 303 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LGALS12Q96DT0 336 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 KAZALD1Q96I82 304 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 NSMCE3Q96MG7 304 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 AMDHD1Q96NU7 426 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 RIT2Q99578 217 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 BTBD10Q9BSF8 475 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CCM2Q9BSQ5 444 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DPH7Q9BTV6 452 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 NDUFAF3Q9BU61 184 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FUNDC2Q9BWH2 189 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 CHID1Q9BWS9 393 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 HINT2Q9BX68 163 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 C1QTNF7Q9BXJ2 289 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ERVK-6Q9BXR3 956 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 PARD6BQ9BYG5 372 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SEMA4CQ9C0C4 833 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DRC3Q9H069 523 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 DHX33Q9H6R0 707 aaKnown RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 METTL8Q9H825 291 aaKnown RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 C10orf88Q9H8K7 445 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 NTN4Q9HB63 628 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SLC38A10Q9HBR0 1119 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LPAR2Q9HBW0 351 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 MYOZ2Q9NPC6 264 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 SPAG4Q9NPE6 437 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 IL37Q9NZH6 218 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ADA2Q9NZK5 511 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 LHX3Q9UBR4 397 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF346Q9UL40 294 aaKnown RBP3.39□□□□□ -1.87
SF3B1-205ENST00000424674 B3GALT5Q9Y2C3 310 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 TMED7Q9Y3B3 224 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 FRMPD4Q14CM0 1322 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 TTC21AQ8NDW8 1320 aa3.39□□□□□ -1.87
SF3B1-205ENST00000424674 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PRSS51A0A1B0GVH4 220 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MEX3AA1L020 520 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DPPA5A6NC42 116 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF840PA6NDX5 716 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CXorf65A6NEN9 183 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SMCO2A6NFE2 343 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DDTLA6NHG4 134 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CASTOR2A6NHX0 329 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 LINC01548A6NM66 108 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 OR5K4A6NMS3 321 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 E7ENQ6 273 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 H3BTX0 84 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 DVL1O14640 695 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 SYT7O43581 403 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 RGS11O94810 467 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ERLIN2O94905 339 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 EGFP01133 1207 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PNMA6AP0CW24 399 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 UQCRBP14927 111 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 AHRP35869 848 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 P2RY2P41231 377 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PPP1R2P41236 205 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 GYG1P46976 350 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 ACLYP53396 1101 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CTSCP53634 463 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 LIMK2P53671 638 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 EMP2P54851 167 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MAZP56270 477 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 CLDN18P56856 261 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 PLP1P60201 277 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 RAB14P61106 215 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 POLR2GP62487 172 aaKnown RBP eCLIP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 MAT1AQ00266 395 aaKnown RBP3.38□□□□□ -1.87
SF3B1-205ENST00000424674 IRF8Q02556 426 aa3.38□□□□□ -1.87
SF3B1-205ENST00000424674 GABPAQ06546 454 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms