RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TEX264Q9Y6I9 313 aa15.04■□□□□ -0
CHMP3-203ENST00000409225 FRG2CA6NGY1 282 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 EMC8O43402 210 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 CD8BP10966 210 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 PTX3P26022 381 aaPredicted RBP15.03■□□□□ -0
CHMP3-203ENST00000409225 IDUAP35475 653 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 XKP51811 444 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 ATP6V0D1P61421 351 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 HMGCS1Q01581 520 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 POU4F1Q01851 419 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 FRG1Q14331 258 aaKnown RBP15.03■□□□□ -0
CHMP3-203ENST00000409225 EXOSC7Q15024 291 aaKnown RBP15.03■□□□□ -0
CHMP3-203ENST00000409225 ADCY4Q8NFM4 1077 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 OR4K14Q8NGD5 310 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 AKAP1Q92667 903 aaKnown RBP eCLIP15.03■□□□□ -0
CHMP3-203ENST00000409225 PLPPR2Q96GM1 343 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 LCORQ96JN0 433 aaPredicted RBP15.03■□□□□ -0
CHMP3-203ENST00000409225 PBKQ96KB5 322 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 BRINP2Q9C0B6 783 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 DDX31Q9H8H2 851 aaKnown RBP15.03■□□□□ -0
CHMP3-203ENST00000409225 OPTCQ9UBM4 332 aa15.03■□□□□ -0
CHMP3-203ENST00000409225 A8MV72 311 aaPredicted RBP15.02■□□□□ -0
CHMP3-203ENST00000409225 EFCAB8A8MWE9 144 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 H0YC42 278 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 K7EPI3 171 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 PGRMC1O00264 195 aaKnown RBP15.02■□□□□ -0
CHMP3-203ENST00000409225 ZIC3O60481 467 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 PIAS1O75925 651 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 CPMP14384 443 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 DPP4P27487 766 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 ARFIP1P53367 373 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 TPD52P55327 224 aaPredicted RBP15.02■□□□□ -0
CHMP3-203ENST00000409225 PHEXP78562 749 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 OCRLQ01968 901 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 BCL2A1Q16548 175 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 FAM111BQ6SJ93 734 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 NUDT13Q86X67 352 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 WFDC8Q8IUA0 241 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 REPS1Q96D71 796 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 TMCO6Q96DC7 493 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 DTNBP1Q96EV8 351 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 TRMT61AQ96FX7 289 aaKnown RBP15.02■□□□□ -0
CHMP3-203ENST00000409225 NAP1L3Q99457 506 aaPredicted RBP15.02■□□□□ -0
CHMP3-203ENST00000409225 MCMBPQ9BTE3 642 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 PINK1Q9BXM7 581 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 CFL2Q9Y281 166 aa15.02■□□□□ -0
CHMP3-203ENST00000409225 SUPT3HB4E1H0 165 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 ACOX3O15254 700 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 SUPT3HO75486 399 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 PEPDP12955 493 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 PORP16435 677 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-203ENST00000409225 ACVR1BP36896 505 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 NEK2P51955 445 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 B3GALT5-AS1P59052 145 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 FGFBP1Q14512 234 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 ETFDHQ16134 617 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 KRTAP24-1Q3LI83 254 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 TEX9Q8N6V9 391 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 FNDC9Q8TBE3 224 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 LRRC39Q96DD0 335 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 TSPAN17Q96FV3 270 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 ALG9Q9H6U8 611 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 NSMCE4AQ9NXX6 385 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 MOCS1Q9NZB8 636 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 NUDT4Q9NZJ9 180 aa15.01□□□□□ -0.01
CHMP3-203ENST00000409225 MRPS18CQ9Y3D5 142 aaKnown RBP15.01□□□□□ -0.01
CHMP3-203ENST00000409225 UQCRHLA0A096LP55 91 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 GOLGA6L10A0A0M3HER8 536 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 C17orf51A8MQB3 221 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 UBXN8O00124 270 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 SEC14L5O43304 696 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 REM1O75628 298 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 FAM157CP0CG43 387 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 PPP3CBP16298 524 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 CDKN1AP38936 164 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 SUCLG1P53597 346 aaKnown RBP15□□□□□ -0.01
CHMP3-203ENST00000409225 CLDN15P56746 228 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 ALKBH2Q6NS38 261 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 ZNF662Q6ZS27 426 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 UBTD2Q8WUN7 234 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 TMBIM1Q969X1 311 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 GTPBP3Q969Y2 492 aaKnown RBP15□□□□□ -0.01
CHMP3-203ENST00000409225 COL21A1Q96P44 957 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 TMEM204Q9BSN7 226 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 SLCO5A1Q9H2Y9 848 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 RNF122Q9H9V4 155 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 MAT2BQ9NZL9 334 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 PLLPQ9Y342 182 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 TSC22D4Q9Y3Q8 395 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 ANGPTL3Q9Y5C1 460 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 PCDHGA11Q9Y5H2 935 aa15□□□□□ -0.01
CHMP3-203ENST00000409225 B4DXG7 233 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 OVOL3O00110 214 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 STMN1P16949 149 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 GRK2P25098 689 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 IVDP26440 423 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 EEFSECP57772 596 aaKnown RBP14.99□□□□□ -0.01
CHMP3-203ENST00000409225 MGAT2Q10469 447 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 CUL3Q13618 768 aa14.99□□□□□ -0.01
CHMP3-203ENST00000409225 FASTKD3Q14CZ7 662 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms