RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 A8MUI8 341 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 NPIPA2E9PIF3 369 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 UBXN8O00124 270 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 EDIL3O43854 480 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 KLHL41O60662 606 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 NXPH2O95156 264 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 NXPH4O95158 308 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 TSPAN8P19075 237 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 OPRL1P41146 370 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 MRPL28Q13084 256 aaKnown RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 SELPLGQ14242 412 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 GCKRQ14397 625 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCDC57Q2TAC2 916 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 C3P1Q6ZMU1 363 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 Q6ZSR9 355 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 NET1Q7Z628 596 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 TBC1D10CQ8IV04 446 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM76AQ8TAV0 307 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 FBXO25Q8TCJ0 367 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 DLX4Q92988 240 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 ADIPOR1Q96A54 375 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 HPDLQ96IR7 371 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 SENP8Q96LD8 212 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 ALKBH3Q96Q83 286 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PSKH2Q96QS6 385 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PUS3Q9BZE2 481 aaKnown RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 Q9HAA7 133 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PLEKHA3Q9HB20 300 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 NRN1Q9NPD7 142 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 TMEM181Q9P2C4 612 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PCSK1NQ9UHG2 260 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PURGQ9UJV8 347 aaKnown RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PPP1R3CQ9UQK1 317 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 RNF6Q9Y252 685 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 AFF2P51816 1311 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 TTC26A0AVF1 554 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 LRRC30A6NM36 301 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 PPIAL4DF5H284 164 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 H3BMH7 237 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 AP3B1O00203 1094 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 CFLARO15519 480 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 NUDT21O43809 227 aaKnown RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 JAK2O60674 1132 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 MAGEC1O60732 1142 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZG16O60844 167 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 KIAA0754O94854 1291 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 ECDO95905 644 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 MT-ND1P03886 318 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 CSF2P04141 144 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 GSTA1P08263 222 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 FCGR2CP31995 323 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 CHI3L1P36222 383 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 HTR5AP47898 357 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 RGS4P49798 205 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 GNB1P62873 340 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 DHODHQ02127 395 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 SRYQ05066 204 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 MLF2Q15773 248 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TPD52L1Q16890 204 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TATDN3Q17R31 274 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 KRTAP27-1Q3LI81 207 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TCHHL1Q5QJ38 904 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 RABGAP1LQ5R372 815 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 WDR25Q64LD2 544 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 ATRAIDQ6UW56 229 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TMEM184AQ6ZMB5 413 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 FRRS1Q6ZNA5 592 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 P4HA3Q7Z4N8 544 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 EIF1ADQ8N9N8 165 aaKnown RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 ICA1LQ8NDH6 482 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 GMPPAQ96IJ6 420 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 LITAFQ99732 161 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TCHPQ9BT92 498 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 LRRC40Q9H9A6 602 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 MEAF6Q9HAF1 191 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 IL1RAPQ9NPH3 570 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 NLGN3Q9NZ94 848 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 MRPS33Q9Y291 106 aaKnown RBP4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 FKBP7Q9Y680 259 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TMEM94Q12767 1356 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCDC7Q96M83 1385 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 AKNAQ7Z591 1439 aa4.12□□□□□ -1.75
HMGB1P13-201ENST00000406019 TRBV5-4A0A0C4DH59 114 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 WASHC1A8K0Z3 465 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 PDLIM1O00151 329 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CLDN5O00501 218 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 OAS1P00973 400 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 UGT2B4P06133 528 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 SFTPCP11686 197 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 UQCRBP14927 111 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCNCP24863 283 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CHRNB4P30926 498 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 RPL9P32969 192 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 RFC2P35250 354 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 ID1P41134 155 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 SULT1E1P49888 294 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 PPT1P50897 306 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms