RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 C3orf38Q5JPI3 329 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 ATAD3CQ5T2N8 411 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 Q7L0L9 218 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 TP53INP2Q8IXH6 220 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 FBXL8Q96CD0 374 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 YBX2Q9Y2T7 364 aaKnown RBP13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 GTF2F2P13984 249 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 CELP19835 753 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 CD97P48960 835 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 SCRN2Q96FV2 425 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 SFXN2Q96NB2 322 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
PCDHA11-201ENST00000398640 SGK494L7N484 410 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 BPIP17213 487 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 ZBED5Q49AG3 693 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 LHFPL3Q86UP9 236 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 IGFN1Q86VF2 1251 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 GID4Q8IVV7 300 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 DRGXA6NNA5 263 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 ZNF12P17014 697 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 STOMP27105 288 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 GDF1P27539 372 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC36A3Q495N2 470 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 UNQ6126/PRO20091Q6UXV3 157 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 PARS2Q7L3T8 475 aaKnown RBP13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 MKLN1Q9UL63 735 aa13.52□□□□□ -0.24
PCDHA11-201ENST00000398640 A0A1B0GVC2 190 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 HOXD9P28356 352 aaPredicted RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 SHQ1Q6PI26 577 aaKnown RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF517Q6ZMY9 492 aaPredicted RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 NEDD4LQ96PU5 975 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 SCP2D1Q9UJQ7 156 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 CD8B2A6NJW9 211 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 CD8BP10966 210 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBG1P23258 451 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 RBPJQ06330 500 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 KCTD18Q6PI47 426 aaPredicted RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 BOCQ9BWV1 1114 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 CSF2P04141 144 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 SPATS1Q496A3 300 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 HSD17B12Q53GQ0 312 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 RAB41Q5JT25 222 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 KLHDC8AQ8IYD2 350 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 ARL14Q8N4G2 192 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 ARRDC3Q96B67 414 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 ZC3H10Q96K80 434 aaKnown RBP13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 MYRFLQ96LU7 910 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 PIP5K1AQ99755 562 aa13.52□□□□□ -0.25
PCDHA11-201ENST00000398640 LAMB1P07942 1786 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 S1PR4O95977 384 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MAGEA8P43361 318 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 GPR143P51810 404 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 NPRL3Q12980 569 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OR52E8Q6IFG1 317 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC27A4Q6P1M0 643 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 DUS1LQ6P1R4 473 aaKnown RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OR9K2Q8NGE7 335 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OR5AR1Q8NGP9 310 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 CD300LFQ8TDQ1 290 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ULBP3Q9BZM4 244 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 C5AR2Q9P296 337 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 PCDHB10Q9UN67 800 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 SSX5O60225 188 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OPN1LWP04000 364 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 CD3GP09693 182 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF33BQ06732 778 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 HYAL1Q12794 435 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MBTPS1Q14703 1052 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 CEACAM19Q7Z692 300 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZFAND4Q86XD8 727 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 A0A096LPI6 279 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF850A8MQ14 1090 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 RBMXP38159 391 aaKnown RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 EMP2P54851 167 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 PHC1P78364 1004 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 TECRLQ5HYJ1 363 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 C6orf132Q5T0Z8 1188 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MINDY2Q8NBR6 621 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF675Q8TD23 568 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms