RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 NPTX1Q15818 432 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 FGD3Q5JSP0 725 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 C6orf141Q5SZD1 244 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 FRRS1Q6ZNA5 592 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 RASSF5Q8WWW0 418 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 PIK3R3Q92569 461 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 TRNT1Q96Q11 434 aaKnown RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 BTBD2Q9BX70 525 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 A4GNTQ9UNA3 340 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 GMPPBQ9Y5P6 360 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 TRIM64CA6NLI5 447 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 PCDHGA12O60330 932 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 UGT2B11O75310 529 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 LGI1O95970 557 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 GASTP01350 101 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 RNF144AP50876 292 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 RPP38P78345 283 aaKnown RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 LSM11P83369 360 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 COLEC12Q5KU26 742 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 ATAD3BQ5T9A4 648 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 NLGN4XQ8N0W4 816 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 AQP11Q8NBQ7 271 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 RAB33BQ9H082 229 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 RBM38Q9H0Z9 239 aaKnown RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 CAPN10Q9HC96 672 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 PRMT8Q9NR22 394 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 PAPOLBQ9NRJ5 636 aaKnown RBP16.74■□□□□ 0.27
CLDND1-204ENST00000394185 FBXO34Q9NWN3 711 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 CLDN16Q9Y5I7 305 aa16.74■□□□□ 0.27
CLDND1-204ENST00000394185 A0A087WXM4 84 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 H3BMH7 237 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 AGRPO00253 132 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 HRO43593 1189 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 XPNPEP2O43895 674 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 PLOD3O60568 738 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 NSA2O95478 260 aaKnown RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 EEF1B2P24534 225 aaKnown RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 ELAVL4P26378 380 aaKnown RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 CD1CP29017 333 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 HOXA6P31267 233 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 ALDH3B2P48448 385 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 ARRB1P49407 418 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 HLCSP50747 726 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 TUBA4AP68366 448 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 HOXC5Q00444 222 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 CDK5R2Q13319 367 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 GNA13Q14344 377 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 CNPY1Q3B7I2 92 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 ZNF311Q5JNZ3 666 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 ZNF770Q6IQ21 691 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 TAGAPQ8N103 731 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 CTHRC1Q96CG8 243 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 NUDT22Q9BRQ3 303 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 IER2Q9BTL4 223 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 GABARAPL3Q9BY60 117 aa16.73■□□□□ 0.27
CLDND1-204ENST00000394185 DNAAF2Q9NVR5 837 aaKnown RBP16.73■□□□□ 0.27
CLDND1-204ENST00000394185 CCDC163A0A0D9SF12 145 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 E9PQ18 207 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 H3BSA7 217 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 HYAL3O43820 417 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CCNB2O95067 398 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 BMP10O95393 424 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CBX7O95931 251 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 RNH1P13489 461 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 MAOAP21397 527 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 PAX7P23759 505 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 RYKP34925 604 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CSTF1Q05048 431 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 KEAP1Q14145 624 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 FAM53BQ14153 422 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 SMN1Q16637 294 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 NDUFA9Q16795 377 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 TYW3Q6IPR3 259 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 FBLIM1Q8WUP2 373 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 RHNO1Q9BSD3 238 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 RASSF1Q9NS23 344 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 PAK1IP1Q9NWT1 392 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 PILRBQ9UKJ0 227 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 ACAD8Q9UKU7 415 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 LIPT1Q9Y234 373 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 HCN4Q9Y3Q4 1203 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 TMEM150CB9EJG8 249 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 OR10H2O60403 315 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 NTN1O95631 604 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 ALPPP05187 535 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 HTR1AP08908 422 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 SLC35E2P0CK97 266 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 CBLP22681 906 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 FMO3P31513 532 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 ZC3H14Q6PJT7 736 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 TMPRSS9Q7Z410 1059 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 BPIFB6Q8NFQ5 453 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 SLC7A13Q8TCU3 470 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 PIGKQ92643 395 aa16.72■□□□□ 0.27
CLDND1-204ENST00000394185 HDAC2Q92769 488 aaKnown RBP16.72■□□□□ 0.27
CLDND1-204ENST00000394185 SPATA5L1Q9BVQ7 753 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms