RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ACTL8Q9H568 366 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NSUN3Q9H649 340 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM231Q9H6L2 316 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TBC1D17Q9HA65 648 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 MRPL15Q9P015 296 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 GALPQ9UBC7 116 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 PCDHB10Q9UN67 800 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 POFUT2Q9Y2G5 429 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NEUROG3Q9Y4Z2 214 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 SNX11Q9Y5W9 270 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NPTNQ9Y639 398 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 GLI3P10071 1580 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 COL5A2P05997 1499 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 COLCA2A8K830 154 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC19A2O60779 497 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 ADCYAP1P18509 176 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 AQP1P29972 269 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 AKR1C3P42330 323 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 CDKN2DP55273 166 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 OR2B8PP59922 312 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RAP2BP61225 183 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RPL38P63173 70 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 BCL2L1Q07817 233 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SNTB2Q13425 540 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PTGES3Q15185 160 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 OR4D1Q15615 310 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SV2CQ496J9 727 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 ATG9BQ674R7 924 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 C16orf54Q6UWD8 224 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MBOAT1Q6ZNC8 495 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MARCH9Q86YJ5 346 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SAMD12Q8N8I0 201 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 OR56B4Q8NH76 319 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 EGFL8Q99944 293 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 NAA11Q9BSU3 229 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 ELOVL4Q9GZR5 314 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 POLR3FQ9H1D9 316 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MINDY3Q9H8M7 445 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM184CQ9NVA4 438 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 LSM2Q9Y333 95 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 NHSL1Q5SYE7 1610 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 H0YCG3 227 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 CCL22O00626 93 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TGM5O43548 720 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 C6orf47O95873 294 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PMP2P02689 132 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SBK2P0C263 348 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 FEN1P39748 380 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RAB5CP51148 216 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 CDH12P55289 794 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 BEX3Q00994 111 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SREBF2Q12772 1141 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PPIGQ13427 754 aaKnown RBP eCLIP8.05□□□□□ -1.121e-6■■■■□ 25.5
NHLRC3-201ENST00000379599 KRBOX4Q5JUW0 171 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM71Q6P5X7 295 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 DOK6Q6PKX4 331 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 BCDIN3DQ7Z5W3 292 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 FOXRED2Q8IWF2 684 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 LGI4Q8N135 537 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 IL31RAQ8NI17 732 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SH3RF2Q8TEC5 729 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 HMGB4Q8WW32 186 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 AMDHD1Q96NU7 426 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PINK1Q9BXM7 581 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MFFQ9GZY8 342 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SIRT7Q9NRC8 400 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 GDE1Q9NZC3 331 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 STOX2Q9P2F5 926 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 AP4M1O00189 453 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 IFRD1O00458 451 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MBTPS2O43462 519 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 YIF1AO95070 293 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 LATS1O95835 1130 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 GUCA1CO95843 209 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 TIMP2P16035 220 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PAX6P26367 422 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 HTR2AP28223 471 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MPIP34949 423 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 PITPNBP48739 271 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 AGTR2P50052 363 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RPS8P62241 208 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 DCDP81605 110 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 MAD2L1Q13257 205 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RSU1Q15404 277 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SURF2Q15527 256 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC39A12Q504Y0 691 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 RFTN2Q52LD8 501 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 ZC3H14Q6PJT7 736 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 B3GNT9Q6UX72 402 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 Q6ZSR9 355 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 KRTCAP2Q8N6L1 136 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 OR9Q2Q8NGE9 314 aa8.05□□□□□ -1.12
NHLRC3-201ENST00000379599 OR1S2Q8NGQ3 325 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms