RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
SF1-205ENST00000377394 HBQ1P09105 142 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■■□□□ 12
SF1-205ENST00000377394 CLDN20P56880 219 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
SF1-205ENST00000377394 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 TMEM145Q8NBT3 493 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
SF1-205ENST00000377394 RAB8BQ92930 207 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 TOX2Q96NM4 488 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 NRTNQ99748 197 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 FUZQ9BT04 418 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
SF1-205ENST00000377394 RACGAP1Q9H0H5 632 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 COMMD3Q9UBI1 195 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 MGAT4BQ9UQ53 548 aa13.06□□□□□ -0.32
SF1-205ENST00000377394 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 ANKDD1BA6NHY2 528 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 AKAP8O43823 692 aaKnown RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 PPM1BO75688 479 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 CISD3P0C7P0 127 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 SDC2P34741 201 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 BSGP35613 385 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 MEDAGQ5VYS4 303 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 CFAP77Q6ZQR2 320 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 C11orf96Q7Z7L8 435 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 ZSWIM3Q96MP5 696 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 MCOLN1Q9GZU1 580 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 SIRT3Q9NTG7 399 aaPredicted RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 PLXND1Q9Y4D7 1925 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 CCDC88CQ9P219 2028 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 INMT-MINDY4F8WBC2 141 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 HMGN4O00479 90 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 TBX19O60806 448 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 RAF1P04049 648 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 RB1P06400 928 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 GPR1P46091 355 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 CLCNKAP51800 687 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 MANFP55145 182 aaKnown RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
SF1-205ENST00000377394 RPA4Q13156 261 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 NCF4Q15080 339 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 DCST1Q5T197 706 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 DDI2Q5TDH0 399 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 KHDRBS2Q5VWX1 349 aaKnown RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 RAET1GQ6H3X3 334 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 PGBD2Q6P3X8 592 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 ZNF782Q6ZMW2 699 aaPredicted RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 C6orf120Q7Z4R8 191 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 ANKRD53Q8N9V6 530 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 NUS1Q96E22 293 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 F2RL3Q96RI0 385 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 MS4A7Q9GZW8 240 aaPredicted RBP13.05□□□□□ -0.32
SF1-205ENST00000377394 OR52A5Q9H2C5 316 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 RHBGQ9H310 441 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 C5AR2Q9P296 337 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 STUB1Q9UNE7 303 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
SF1-205ENST00000377394 HYKKA2RU49 373 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 FAAHO00519 579 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 OR10H3O60404 316 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 KCNJ5P48544 419 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 RIN1Q13671 783 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 EXOSC2Q13868 293 aaKnown RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 SPHARQ15513 63 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 FAM92BQ6ZTR7 304 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 KRT78Q8N1N4 520 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 PPP1R16AQ96I34 528 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 MARVELD1Q9BSK0 173 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 ZFP64Q9NPA5 681 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 TXNL4BQ9NX01 149 aaKnown RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 AHSPQ9NZD4 102 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 SEC14L4Q9UDX3 406 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 ACAD8Q9UKU7 415 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 SNX11Q9Y5W9 270 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 HEPACAM2A8MVW5 462 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 MMP20O60882 483 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 CFDP00746 253 aaPredicted RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 H1F0P07305 194 aaKnown RBP13.04□□□□□ -0.32
SF1-205ENST00000377394 SDHBP21912 280 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 XKP51811 444 aa13.04□□□□□ -0.32
SF1-205ENST00000377394 SRP54P61011 504 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms