RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MYOGP15173 224 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 XCR1P46094 333 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TLE3Q04726 772 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 OR52N2Q8NGI0 321 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 FCAMRQ8WWV6 532 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ZNF700Q9H0M5 742 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 FBXL3Q9UKT7 428 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 SRPK3Q9UPE1 567 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 HTRA2O43464 458 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 SNAP29O95721 258 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 OXSR1O95747 527 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 CTXN1P60606 82 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TUBA1BP68363 451 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TUBA4AP68366 448 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 CTBSQ01459 385 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 BCL2L15Q5TBC7 163 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ZNF773Q6PK81 442 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 RBM24Q9BX46 236 aaKnown RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 FMO6PO60774 539 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 HOXC13P31276 330 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 KCNAB2Q13303 367 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NEIL2Q969S2 332 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 PTERQ96BW5 349 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 RNF215Q9Y6U7 377 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 CRISP1P54107 249 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 RPL19P84098 196 aaKnown RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 TRAM1Q15629 374 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ATAD3CQ5T2N8 411 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 PRAMEF8Q5VWM4 474 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 PRAMEF7Q5VXH5 474 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 LETMD1Q6P1Q0 360 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ZNF367Q7RTV3 350 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 HS3ST5Q8IZT8 346 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 INPP5KQ9BT40 448 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 TAAR2Q9P1P5 351 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NUP98P52948 1817 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ZCWPW2A0A1B0GU75 182 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 PVRP15151 417 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 DCKP27707 260 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 HLA-FP30511 346 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NFATC4Q14934 902 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ENPP6Q6UWR7 440 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NUDT15Q9NV35 164 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ITGB1BP2Q9UKP3 347 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 SLC22A31A6NKX4 558 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 H3BSA7 217 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 MAGEA2P43356 314 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 APOFQ13790 326 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 SLC18B1Q6NT16 456 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 CYS1Q717R9 158 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 TMPRSS12Q86WS5 348 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 GALNT6Q8NCL4 622 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 OR7G3Q8NG95 312 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 MUS81Q96NY9 551 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 SOX17Q9H6I2 414 aaPredicted RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 CD79AP11912 226 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ANXA3P12429 323 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ZNF12P17014 697 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 HOXD9P28356 352 aaPredicted RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 PYCR1P32322 319 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 MAP2K4P45985 399 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ACTA2P62736 377 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ACTG2P63267 376 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 TMEM31Q5JXX7 168 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 TRAPPC6BQ86SZ2 158 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 ZNF619Q8N2I2 560 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 SAMD12Q8N8I0 201 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 GPR150Q8NGU9 434 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NEIL3Q8TAT5 605 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 NAT6Q93015 286 aa12.92□□□□□ -0.34
GPC6-201ENST00000377047 HEMK1Q9Y5R4 338 aaPredicted RBP12.92□□□□□ -0.34
GPC6-201ENST00000377047 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 LRRN3E7EW58 273 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 GDF1P27539 372 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 AKR1D1P51857 326 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 CTSCP53634 463 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 RAB11FIP2Q7L804 512 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 LRRN3Q9H3W5 708 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 TRBV11-1A0A0K0K1C0 115 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 TRAPPC13A5PLN9 417 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPC6-201ENST00000377047 KLBQ86Z14 1044 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 VWA5B2Q8N398 1253 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
GPC6-201ENST00000377047 ZNF350Q9GZX5 532 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 PRSS21Q9Y6M0 314 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 CD8B2A6NJW9 211 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 CCRL2O00421 344 aa12.91□□□□□ -0.34
GPC6-201ENST00000377047 CD8BP10966 210 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms