RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ABCB1P08183 1280 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 ZCCHC18P0CG32 403 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CT45A8P0DMV1 189 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CT45A9P0DMV2 189 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 NAGAP17050 411 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CD96P40200 585 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CASRP41180 1078 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CYB561P49447 251 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TNFSF10P50591 281 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 NR0B1P51843 470 aaKnown RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 NRG3P56975 720 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 ARG2P78540 354 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TUBA3CQ13748 450 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TLR1Q15399 786 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CT45A2Q5DJT8 189 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 EXOSC6Q5RKV6 272 aaKnown RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TUBA3EQ6PEY2 450 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 Q6ZS92 163 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 C6orf120Q7Z4R8 191 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 DND1Q8IYX4 353 aaKnown RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TRIML2Q8N7C3 387 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 GTF2H4Q92759 462 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 SGCZQ96LD1 299 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 MS4A4EQ96PG1 132 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 PANX1Q96RD7 426 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 NXF5Q9H1B4 397 aaKnown RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 GPATCH2Q9NW75 528 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 SNX8Q9Y5X2 465 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 NBASA2RRP1 2371 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 TRAV17A0A0B4J275 112 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 CAPN14A8MX76 684 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NR5A2O00482 541 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 RFXANKO14593 260 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NME6O75414 186 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NEURL1O76050 574 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NKX2-2O95096 273 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 HMGN2P05204 90 aaKnown RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SNRPB2P08579 225 aaKnown RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 KRT16P08779 473 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 FBXO45P0C2W1 286 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 CD1EP15812 388 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 CAPN3P20807 821 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SOX3P41225 446 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 PRIM2P49643 509 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 PRKAG1P54619 331 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 PSG6Q00889 435 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ZNF155Q12901 538 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 KLF10Q13118 480 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ZNHIT3Q15649 155 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SPDYE7PQ495Y7 208 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 VPS26BQ4G0F5 336 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 CYP27C1Q4G0S4 372 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 MFSD12Q6NUT3 480 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NPSR1Q6W5P4 371 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 GK5Q6ZS86 529 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ZNF621Q6ZSS3 439 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SLC34A3Q8N130 599 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 HORMAD2Q8N7B1 307 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ANKS4BQ8N8V4 417 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 MDS2Q8NDY4 140 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ASB15Q8WXK1 588 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SPACA9Q96E40 222 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NEURL3Q96EH8 262 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 C16orf58Q96GQ5 468 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 INPP5KQ9BT40 448 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ACTRT3Q9BYD9 372 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NMUR2Q9GZQ4 415 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 LRFN1Q9P244 771 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 VPS4AQ9UN37 437 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 ARL2BPQ9Y2Y0 163 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NDUFAF1Q9Y375 327 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 PCDHGB6Q9Y5F9 930 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 NPFFR2Q9Y5X5 522 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 CAPN7Q9Y6W3 813 aa10.49□□□□□ -0.73
HSPG2-202ENST00000374676 SVILO95425 2214 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 A0A096LPI6 279 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 RNF103-CHMP3A0A140T963 221 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 ASPDHA6ND91 283 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 A8MVJ9 347 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 OR6B1O95007 311 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 ALOX5P09917 674 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 ABCD3P28288 659 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 PTPN6P29350 595 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 SOAT1P35610 550 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 CDKN2CP42773 168 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 MAGEA8P43361 318 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 CD97P48960 835 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 MAN2A2P49641 1150 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 TMED10P49755 219 aaKnown RBP10.48□□□□□ -0.73
HSPG2-202ENST00000374676 CORO7P57737 925 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 TXNL4AP83876 142 aaKnown RBP10.48□□□□□ -0.73
HSPG2-202ENST00000374676 OC90Q02509 493 aaPredicted RBP10.48□□□□□ -0.73
HSPG2-202ENST00000374676 KLRB1Q12918 225 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 GAB1Q13480 694 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 TP53BP2Q13625 1128 aa10.48□□□□□ -0.73
HSPG2-202ENST00000374676 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
HSPG2-202ENST00000374676 LASP1Q14847 261 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms