RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ABTB1Q969K4 478 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-202ENST00000374487 C16orf58Q96GQ5 468 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 POLR2J3Q9H1A7 115 aaKnown RBP11.36□□□□□ -0.59
HMGCL-202ENST00000374487 SYNPO2LQ9H987 977 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 FTSJ1Q9UET6 329 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 KLF15Q9UIH9 416 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 CES1P1Q9UKY3 287 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 PCOLCE2Q9UKZ9 415 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 SLC6A14Q9UN76 642 aa11.36□□□□□ -0.59
HMGCL-202ENST00000374487 A0A0G2JPF8 293 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 GSAPA4D1B5 854 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 EFCAB10A6NFE3 127 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CLDN24A6NM45 220 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 HNRNPCL3B7ZW38 293 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CNOT3O75175 753 aaKnown RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF217O75362 1048 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 NME6O75414 186 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 SOX14O95416 240 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CHRM4P08173 479 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF888P0CJ79 500 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 NR2F6P10588 404 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 OPRL1P41146 370 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 MC3RP41968 323 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 SRP54P61011 504 aaKnown RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 DUSP2Q05923 314 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 KIR2DS3Q14952 304 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 NR1D2Q14995 579 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 PRRT3Q5FWE3 981 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CASP12Q6UXS9 341 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 TRIM73Q86UV7 250 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 TRIM69Q86WT6 500 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 NRROSQ86YC3 692 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 TMCO5AQ8N6Q1 288 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 NUP43Q8NFH3 380 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 OR9A2Q8NGT5 310 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 OR10G6Q8NH81 332 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 RPL3LQ92901 407 aaKnown RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 GAL3ST3Q96A11 431 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ELP4Q96EB1 424 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ZHX1-C8orf76Q96EF9 292 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 DHRS1Q96LJ7 313 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 IL4I1Q96RQ9 567 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 DNAAF2Q9NVR5 837 aaKnown RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 SLC13A4Q9UKG4 626 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 A0A1W2PS29 197 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CLDN25C9JDP6 229 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 TLR4O00206 839 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 TNFRSF10CO14798 259 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 AIREO43918 545 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 MAGP20916 626 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 AKT2P31751 481 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 LIPAP38571 399 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 XKP51811 444 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ILKQ13418 452 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ATAD3BQ5T9A4 648 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 VN1R4Q7Z5H5 301 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 COL26A1Q96A83 441 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-202ENST00000374487 Q96MT0 163 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 BTBD2Q9BX70 525 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 PALMDQ9NP74 551 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 REV1Q9UBZ9 1251 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 ACAD8Q9UKU7 415 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 A4GNTQ9UNA3 340 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 CORINQ9Y5Q5 1042 aa11.35□□□□□ -0.59
HMGCL-202ENST00000374487 DSPPQ9NZW4 1301 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 A0A1W2PRQ8 180 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 LGI1O95970 557 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 HSMCR30P0CW71 290 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 POLR2CP19387 275 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 CPN2P22792 545 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 TGFBR2P37173 567 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 MPLP40238 635 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 OLR1P78380 273 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF846Q147U1 533 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 SUZ12Q15022 739 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 FBXO42Q6P3S6 717 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 PGBD2Q6P3X8 592 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 DGLUCYQ7Z3D6 616 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 C16orf62Q7Z3J2 963 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 KAT2AQ92830 837 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 CRELD1Q96HD1 420 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 OR7D2Q96RA2 312 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ROGDIQ9GZN7 287 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 QRSL1Q9H0R6 528 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 MIR1-1HGQ9H1L0 117 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ANKRA2Q9H9E1 313 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 GMEB2Q9UKD1 530 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 KCNE3Q9Y6H6 103 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF292O60281 2723 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms