RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 FRS3O43559 492 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 LRG1P02750 347 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CHRM4P08173 479 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CELP19835 753 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 PSMB5P28074 263 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CCR2P41597 374 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 INPP1P49441 399 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 AGFG1P52594 562 aaKnown RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 LRRC32Q14392 662 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 ZNF57Q68EA5 555 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 ARIH2OSQ8N7S6 290 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 HCAR2Q8TDS4 363 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 DTD2Q96FN9 168 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 PPP1R16AQ96I34 528 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 ISYNA1Q9NPH2 558 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 ZCCHC3Q9NUD5 404 aaKnown RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 PCYT1BQ9Y5K3 369 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 COL4A6Q14031 1691 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 A0A087WUU8 490 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 TGM5O43548 720 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 PLOD3O60568 738 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 ICMTO60725 284 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 PRKRAO75569 313 aaKnown RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 ALPPL2P10696 532 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 FRKP42685 505 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 OR3A3P47888 321 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 PRKAG1P54619 331 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 FUT5Q11128 374 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 MARVELD1Q9BSK0 173 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 HCFC1R1Q9NWW0 138 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 NUP210Q8TEM1 1887 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 FAM170BA6NMN3 283 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 KPNA3O00505 521 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 PPM1DO15297 605 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 ORC5O43913 435 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 POP7O75817 140 aaKnown RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 ACADLP28330 430 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 PPP2R1BP30154 601 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 CDH11P55287 796 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 ZNF155Q12901 538 aaPredicted RBP15.42■□□□□ 0.06
SDC4-201ENST00000372733 RAET1GQ6H3X3 334 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 KIAA1161Q6NSJ0 714 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 LCTLQ6UWM7 567 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 FAM109AQ8N4B1 249 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 DTX3Q8N9I9 347 aa15.42■□□□□ 0.06
SDC4-201ENST00000372733 KIAA1549LQ6ZVL6 1849 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 IRGMA1A4Y4 181 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 KDM4EB2RXH2 506 aaPredicted RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 TBX19O60806 448 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SLC43A1O75387 559 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SF3A2Q15428 464 aaKnown RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 SMUG1Q53HV7 270 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 LY6G5CQ5SRR4 150 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SIGIRRQ6IA17 410 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 C17orf64Q86WR6 236 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 ELMOD2Q8IZ81 293 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 PLA2G15Q8NCC3 412 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 KLK6Q92876 244 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 IRF7Q92985 503 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 MED30Q96HR3 178 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 FAM46AQ96IP4 442 aaKnown RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 KCNJ15Q99712 375 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 GTPBP2Q9BX10 602 aaKnown RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 GLIPR2Q9H4G4 154 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 INMT-MINDY4F8WBC2 141 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SPINT1O43278 529 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SYN1P17600 705 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 GSTM3P21266 225 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 CSTF1Q05048 431 aaKnown RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 MAB21L1Q13394 359 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 COL9A2Q14055 689 aaPredicted RBP15.41■□□□□ 0.06
SDC4-201ENST00000372733 VASNQ6EMK4 673 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SLC30A6Q6NXT4 461 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 TRILQ7L0X0 811 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 PRICKLE2Q7Z3G6 844 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SLC37A3Q8NCC5 494 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 BBS1Q8NFJ9 593 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SUN5Q8TC36 379 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 SLC38A2Q96QD8 506 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 EPHX3Q9H6B9 360 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 TDP1Q9NUW8 608 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
SDC4-201ENST00000372733 GLOD5A6NK44 160 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 SNTNA6NMZ2 147 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.4■□□□□ 0.06
SDC4-201ENST00000372733 STATHP02808 62 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 GNSP15586 552 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 METAP1DQ6UB28 335 aaPredicted RBP15.4■□□□□ 0.06
SDC4-201ENST00000372733 NUDT13Q86X67 352 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 OR4M2Q8NGB6 313 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 SETD7Q8WTS6 366 aaKnown RBP15.4■□□□□ 0.06
SDC4-201ENST00000372733 TCEAL4Q96EI5 215 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 COQ10AQ96MF6 247 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 ZCCHC2Q9C0B9 1178 aaKnown RBP15.4■□□□□ 0.06
SDC4-201ENST00000372733 SLC23A1Q9UHI7 598 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 TEKT2Q9UIF3 430 aa15.4■□□□□ 0.06
SDC4-201ENST00000372733 MEN1O00255 615 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms