RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SPRP35270 261 aaPredicted RBP3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 SOX6P35712 828 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CAPGP40121 348 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 RAG2P55895 527 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 HAND2P61296 217 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF85Q03923 595 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 OVGP1Q12889 678 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 EXOSC2Q13868 293 aaKnown RBP3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF311Q5JNZ3 666 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CBLN3Q6UW01 205 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 WASH2PQ6VEQ5 465 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 STOX1Q6ZVD7 989 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ARMCX2Q7L311 632 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ERASQ7Z444 233 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 HSCBQ8IWL3 235 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CENPSQ8N2Z9 138 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF491Q8N8L2 437 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 STKLD1Q8NE28 680 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 BEST4Q8NFU0 473 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 OR4F17Q8NGA8 305 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 OR10T2Q8NGX3 314 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 FLVCR1-AS1Q8TAF5 88 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 MIPOL1Q8TD10 442 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 NR4A3Q92570 626 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 LHX4Q969G2 390 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIM44Q96DX7 344 aaPredicted RBP3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 VPS39Q96JC1 886 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 VSTM2LQ96N03 204 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 VPS35Q96QK1 796 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 OR4F4Q96R69 305 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 FAM173AQ9BQD7 235 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIM51Q9BSJ1 452 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TPPP3Q9BW30 176 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TSPY26PQ9H489 355 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 IL1RL2Q9HB29 575 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 FAM114A2Q9NRY5 505 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 AGPAT5Q9NUQ2 364 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF446Q9NWS9 450 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 GHRLQ9UBU3 117 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 MGAT4AQ9UM21 535 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 B9D1Q9UPM9 204 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 DHRS7Q9Y394 339 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CPQQ9Y646 472 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CNTNAP2Q9UHC6 1331 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 IGHV3-16A0A0C4DH30 117 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 SDHDO14521 159 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 MAPK13O15264 365 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 PDE5AO76074 875 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 POP4O95707 220 aaKnown RBP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 SEMA4FO95754 770 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 CHRNA1P02708 482 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 PCCBP05166 539 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 KRT13P13646 458 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 TSPAN8P19075 237 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF10P21506 573 aaPredicted RBP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 PPP2R1BP30154 601 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 HTR5AP47898 357 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 GSK3BP49841 420 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC7A2P52569 658 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 NAPAP54920 295 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 NOP14P78316 857 aaKnown RBP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 IL9RQ01113 521 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 BNIP1Q12981 228 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIP10Q15642 601 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 PCK2Q16822 640 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 ANKDD1AQ495B1 522 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 SULT1C3Q6IMI6 304 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 DOK6Q6PKX4 331 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 TMEM184AQ6ZMB5 413 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 LPCAT2Q7L5N7 544 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 CATSPER3Q86XQ3 398 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 GRAMD2AQ8IUY3 354 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 C4orf32Q8N8J7 132 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 IPMKQ8NFU5 416 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 ADIPOR1Q96A54 375 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 WBP1Q96G27 269 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 TTYH2Q9BSA4 534 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 LRRC61Q9BV99 259 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 JPT2Q9H910 190 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 ELL3Q9HB65 397 aaPredicted RBP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 MLXQ9UH92 298 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 MUTYHQ9UIF7 546 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 RNF6Q9Y252 685 aa3.03□□□□□ -1.92
RNU6-28P-201ENST00000362378 CARMIL1Q5VZK9 1371 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 CCDC7Q96M83 1385 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 TEX48A0A1B0GUV7 120 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 A0A1W2PPR1 153 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 LRRC30A6NM36 301 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 WASHC1A8K0Z3 465 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 K7ERI5 159 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 E2F3O00716 465 aa3.02□□□□□ -1.93
RNU6-28P-201ENST00000362378 TYROBPO43914 113 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms