RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RBFOX1Q9NWB1 397 aaKnown RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 TAS2R8Q9NYW2 309 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 H7BY64 318 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 PTGESO14684 152 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 PTPN6P29350 595 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FLT3LGP49771 235 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 IER5LQ5T953 404 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 NUP54Q7Z3B4 507 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FBXO15Q8NCQ5 510 aaPredicted RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 TMEM163Q8TC26 289 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 C7orf34Q96L11 122 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 PRAP1Q96NZ9 151 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 GPR78Q96P69 363 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 TAPBPLQ9BX59 468 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ERVK-19Q9WJR5 959 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 TMEM98Q9Y2Y6 226 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 RREB1Q92766 1687 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 A0A1B0GVC2 190 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 HYKKA2RU49 373 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 M0R3H8 397 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ARPC1BO15143 372 aaKnown RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 SLC43A1O75387 559 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 CTNNB1P35222 781 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CAV3P56539 151 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 PIN1Q13526 163 aaPredicted RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 HSF5Q4G112 596 aaPredicted RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 PDZD3Q86UT5 571 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 HDDC3Q8N4P3 179 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 OR14C36Q8NHC7 312 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 WDR20Q8TBZ3 569 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 GIMAP1Q8WWP7 306 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 WDR26Q9H7D7 661 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FABP7O15540 132 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ACP2P11117 423 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CXCR1P25024 350 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FRMPD2BQ6IN97 320 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FAM86B1Q8N7N1 296 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 WFIKKN2Q8TEU8 576 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 SLC41A3Q96GZ6 507 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 F2RL3Q96RI0 385 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 RBM38Q9H0Z9 239 aaKnown RBP13.25□□□□□ -0.29
SMC5-201ENST00000361138 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 GRXCR1A8MXD5 290 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 F8W036 122 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 FOSL2P15408 326 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ARRB2P32121 409 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ARHGAP11AQ6P4F7 1023 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 DYNC2LI1Q8TCX1 351 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 SCAMP4Q969E2 229 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 CNTNAP3BQ96NU0 1288 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
SMC5-201ENST00000361138 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GSRP00390 522 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 PDGFAP04085 211 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 JUNDP17535 347 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 WASP42768 502 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 Q6ZVL8 140 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 TMEM173Q86WV6 379 aaPredicted RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 NRMQ8IXM6 262 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 SLC22A18Q96BI1 424 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 CAPNS2Q96L46 248 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 UBXN7O94888 489 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GASTP01350 101 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 ARSBP15848 533 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GABRA5P31644 462 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 VAMP2P63027 116 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 TMEM205Q6UW68 189 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 SCD5Q86SK9 330 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 CMTM8Q8IZV2 173 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 TUBB1Q9H4B7 451 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 CNIH4Q9P003 139 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GABRPO00591 440 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GJB3O75712 270 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 FRKP42685 505 aaPredicted RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 S100A12P80511 92 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 OR4C11Q6IEV9 310 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 RNF111Q6ZNA4 994 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 GDPD3Q7L5L3 318 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 PNLDC1Q8NA58 520 aaKnown RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 OR6N2Q8NGY6 317 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 OR51A7Q8NH64 312 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 SETD7Q8WTS6 366 aaKnown RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 OR5M11Q96RB7 305 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
SMC5-201ENST00000361138 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 NOX1Q9Y5S8 564 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 APODP05090 189 aa13.24□□□□□ -0.29
SMC5-201ENST00000361138 DRD2P14416 443 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms