RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ALOX12P18054 663 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 PCGF2P35227 344 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 KRT20P35900 424 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 UGT2B10P36537 528 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 ARL4DP49703 201 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 CLK1P49759 484 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 KCNJ10P78508 379 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 RGNQ15493 299 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 MPEG1Q2M385 716 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 PERM1Q5SV97 790 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 MLIPQ5VWP3 458 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 MRM1Q6IN84 353 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 FAM180BQ6P0A1 224 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 USP53Q70EK8 1073 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 AHSA2Q719I0 299 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 GALNT10Q86SR1 603 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 CCDC74AQ96AQ1 378 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 CIDECQ96AQ7 238 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 GTPBP2Q9BX10 602 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 ARMC7Q9H6L4 198 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 AASSQ9UDR5 926 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
SQSTM1-201ENST00000360718 CPED1A4D0V7 1026 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 WASHC1A8K0Z3 465 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 DNAJB6O75190 326 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SMIM10L1P0DMW3 83 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ANXA8P13928 327 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 CD1CP29017 333 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 BUD31P41223 144 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SKP1P63208 163 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SELENOWP63302 87 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ELOAQ14241 798 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ENTHD1Q8IYW4 607 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 MFSD4AQ8N468 514 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 DNAJC22Q8N4W6 341 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 EXOSC8Q96B26 276 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SMIM10Q96HG1 83 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 LOXL4Q96JB6 756 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 DACH2Q96NX9 599 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 COPS4Q9BT78 406 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SPACA6W5XKT8 324 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 E9PQ18 207 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PCDHGA12O60330 932 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 C6orf47O95873 294 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 BMP4P12644 408 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 CD40LGP29965 261 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TLX1P31314 330 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 RRM2P31350 389 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PPP5CP53041 499 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 MANFP55145 182 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 NCS1P62166 190 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 IQCCQ4KMZ1 466 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ZC3H14Q6PJT7 736 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PRSS41Q7RTY9 318 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 MCFD2Q8NI22 146 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SPPL2AQ8TCT8 520 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PSD2Q9BQI7 771 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 MMP27Q9H306 513 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 GIMAP4Q9NUV9 329 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 MS4A12Q9NXJ0 267 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TAS2R9Q9NYW1 312 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 TAS2R7Q9NYW3 318 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 C5AR2Q9P296 337 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 OSGIN1Q9UJX0 560 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 PCDHGA6Q9Y5G7 932 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 SLC22A7Q9Y694 548 aa12.36□□□□□ -0.43
SQSTM1-201ENST00000360718 A0A1W2PR48 441 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 PROM1O43490 865 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 ITGA2P17301 1181 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 NTSP30990 170 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 GGT2P36268 569 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 GABRA4P48169 554 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 RPS3AP61247 264 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 HBA1P69905 142 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 TEKQ02763 1124 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 RBBP4Q09028 425 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 NDUFA9Q16795 377 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 TCTE1Q5JU00 501 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 TMEM236Q5W0B7 351 aa12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 WDR74Q6RFH5 385 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-201ENST00000360718 GOT1L1Q8NHS2 421 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms