RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GMPRP36959 345 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SNTB2Q13425 540 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 MOGSQ13724 837 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 GPR62Q9BZJ7 368 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 FAIMQ9NVQ4 179 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 LSM5Q9Y4Y9 91 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 A0A0G2JMP0 313 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SLC35E2BP0CK96 405 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 RAB3BP20337 219 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 CHMP24386 653 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 MARVELD2Q8N4S9 558 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 ENDOVQ8N8Q3 282 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 OR4M2Q8NGB6 313 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 OR5L2Q8NGL0 311 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 CIDECQ96AQ7 238 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 NFAT5O94916 1531 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 OR5K4A6NMS3 321 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 SNAI1O95863 264 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-202ENST00000359082 SLC16A8O95907 504 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 APOC3P02656 99 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 NSDHLQ15738 373 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 COMMD7Q86VX2 200 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 ZNF440Q8IYI8 595 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 FKBP10Q96AY3 582 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 LGALS12Q96DT0 336 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PRSS56P0CW18 603 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 HOXD13P35453 343 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 C10orf62Q5T681 223 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PELOQ9BRX2 385 aaKnown RBP17.47■□□□□ 0.39
SHANK1-202ENST00000359082 YY2O15391 372 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 RAD1O60671 282 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 FDXRP22570 491 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 ZNF791Q3KP31 576 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-202ENST00000359082 SOBPA7XYQ1 873 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 FZD9O00144 591 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 CDK2P24941 298 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PBX2P40425 430 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PRKXP51817 358 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 RPS15P62841 145 aaKnown RBP17.47■□□□□ 0.39
SHANK1-202ENST00000359082 HACD2Q6Y1H2 254 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 RARRES3Q9UL19 164 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 OR8U9P0C7N5 309 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 CTXN1P60606 82 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 OR8J1Q8NGP2 316 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 ECHDC3Q96DC8 303 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 TMEM19Q96HH6 336 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PBDC1Q9BVG4 233 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 SLC7A7Q9UM01 511 aa17.47■□□□□ 0.39
SHANK1-202ENST00000359082 PEX14O75381 377 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 IL1RNP18510 177 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 GGT1P19440 569 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 CSNK2A1P68400 391 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 KIAA0895LQ68EN5 471 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 MAMDC2Q7Z304 686 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 EGFL6Q8IUX8 553 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 CSNK2A3Q8NEV1 391 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 TSPEARQ8WU66 669 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 ABCG5Q9H222 651 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 GSTM4Q03013 218 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 LARP4Q71RC2 724 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 OR51B6Q9H340 312 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 LAMTOR5O43504 91 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 SYT7O43581 403 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 KNG1P01042 644 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 HTR2BP41595 481 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 HHEXQ03014 270 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 NRMQ8IXM6 262 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 KLHDC8AQ8IYD2 350 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 OR2B2Q9GZK3 357 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 KCMF1Q9P0J7 381 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 LRFN1Q9P244 771 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 A0A0U1RQK1 487 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 ANKRD28O15084 1053 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 CRTAPO75718 401 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 SNRPD2P62316 118 aaKnown RBP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 CST6Q15828 149 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 LRP10Q7Z4F1 713 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 OR52B6Q8NGF0 335 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 C7orf50Q9BRJ6 194 aaKnown RBP17.46■□□□□ 0.39
SHANK1-202ENST00000359082 TPSD1Q9BZJ3 242 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 C5AR2Q9P296 337 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 FIGLAQ6QHK4 219 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 UNQ6126/PRO20091Q6UXV3 157 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 TAS1R3Q7RTX0 852 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 TSPAN33Q86UF1 283 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 TM9SF4Q92544 642 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 MYRFLQ96LU7 910 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 INPP5KQ9BT40 448 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 ARMC1Q9NVT9 282 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 MKS1Q9NXB0 559 aa17.46■□□□□ 0.39
SHANK1-202ENST00000359082 PIK3C2AO00443 1686 aa17.46■□□□□ 0.38
SHANK1-202ENST00000359082 MITFO75030 526 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 PNMTP11086 282 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 RAB5BP61020 215 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 NKPD1Q17RQ9 610 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 RRNAD1Q96FB5 475 aaKnown RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 GPRC5BQ9NZH0 403 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms