RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CRELD2Q6UXH1 353 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 RPF2Q9H7B2 306 aaKnown RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 RAB9BQ9NP90 201 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 FAM86C1Q9NVL1 165 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 TGFB1I1O43294 461 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 PGCP20142 388 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF852Q6ZMS4 543 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZSWIM9Q86XI8 627 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 BADQ92934 168 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 CGREF1Q99674 301 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 HEPACAM2A8MVW5 462 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 H3BQ06 376 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 GOSR2O14653 212 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 BEST1O76090 585 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SERPINE2P07093 398 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 H2AFB2P0C5Z0 115 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 CREB1P16220 341 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SEC61A1P61619 476 aaKnown RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 NKX6-1P78426 367 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SCAPQ12770 1279 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF439Q8NDP4 499 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 OR6C4Q8NGE1 309 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 NSUN3Q9H649 340 aaKnown RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 NLE1Q9NVX2 485 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 CKAP5Q14008 2032 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 CD72P21854 359 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 OR8B8Q15620 311 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 SLC22A6Q4U2R8 563 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 C22orf39Q6P5X5 142 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 CTU1Q7Z7A3 348 aaKnown RBP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 CCDC71LQ8N9Z2 235 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 SERINC2Q96SA4 455 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 PUS1Q9Y606 427 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 FSCN2O14926 492 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 PAHP00439 452 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 GNB2P62879 340 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 STEAP4Q687X5 459 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 Q6ZVL8 140 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 TEPSINQ96N21 525 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 PCDHGA5Q9Y5G8 931 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 SHC2P98077 582 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF33BQ06732 778 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 CREB3L2Q70SY1 520 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 Q8N402 240 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 IQCF1Q8N6M8 205 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 OR9A2Q8NGT5 310 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 PIGCQ92535 297 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 FGFBP2Q9BYJ0 223 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 CD244Q9BZW8 370 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 PRDM9Q9NQV7 894 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 TEX10Q9NXF1 929 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 A0A1W2PPV4 95 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 K7EPK0 472 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 RNH1P13489 461 aaKnown RBP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 BAIAP2L2Q6UXY1 529 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 CLEC20AQ6ZU45 233 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 FAM71E2Q8N5Q1 922 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 XCR1P46094 333 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 LRRC25Q8N386 305 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 DCUN1D4Q92564 292 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 SDCBP2Q9H190 292 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 ASF1BQ9NVP2 202 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 KITLGP21583 273 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 GDF1P27539 372 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 LGALS4P56470 323 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 FITM2Q8N6M3 262 aa16.44■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF845Q96IR2 970 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-201ENST00000356083 ALDOBP05062 364 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PYCR1P32322 319 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PIK3CBP42338 1070 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ACY1Q03154 408 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 RAB11BQ15907 218 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 RBMXL3Q8N7X1 1067 aaKnown RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 OR9I1Q8NGQ6 314 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 OR4K13Q8NH42 304 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TMEM59Q9BXS4 323 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 UNC119BA6NIH7 251 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TIMM8AO60220 97 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TGM6O95932 706 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 IL1RNP18510 177 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 RFC2P35250 354 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ACSBG2Q5FVE4 666 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 C3orf49Q96BT1 292 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF641Q96N77 438 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PLEKHM1Q9Y4G2 1056 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 C2CD4BA6NLJ0 364 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TOR1AO14656 332 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ARHGEF15O94989 841 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 SERPINA5P05154 406 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 AGTR1P30556 359 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TMEM53Q6P2H8 277 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TUBA3EQ6PEY2 450 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 MARVELD2Q8N4S9 558 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 SLC35F5Q8WV83 523 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 MRI1Q9BV20 369 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 HS3ST4Q9Y661 456 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 APEHP13798 732 aaKnown RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF30P17039 623 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms