RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 OR8D1Q8WZ84 308 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 PINK1Q9BXM7 581 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 NDEL1Q9GZM8 345 aa23.08■■□□□ 1.28
CPNE1-202ENST00000352393 TRDV1A0A1B0GX56 115 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 QPRTQ15274 297 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 ZNF793Q6ZN11 406 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 ENKURQ8TC29 256 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 GNPDA2Q8TDQ7 276 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 SLA2Q9H6Q3 261 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 PPP1R3EQ9H7J1 279 aa23.07■■□□□ 1.28
CPNE1-202ENST00000352393 WASHC1A8K0Z3 465 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 HIDE1A8MVS5 230 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SLC9A3R1O14745 358 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-202ENST00000352393 LCMT2O60294 686 aaKnown RBP23.06■■□□□ 1.28
CPNE1-202ENST00000352393 HLA-DMAP28067 261 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 NTSP30990 170 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SSR2P43308 183 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 CAV3P56539 151 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 CSNK1G2P78368 415 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 WASH2PQ6VEQ5 465 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SHFQ7M4L6 423 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SFXN5Q8TD22 340 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 ZC3HAV1LQ96H79 300 aaKnown RBP23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SLC27A6Q9Y2P4 619 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 MAN2B1O00754 1011 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 FKTNO75072 461 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 PRKRAO75569 313 aaKnown RBP23.06■■□□□ 1.28
CPNE1-202ENST00000352393 CLEC3AO75596 197 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SOX18P35713 384 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 TAS2R38P59533 333 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 TSPAN31Q12999 210 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 HNRNPA1L2Q32P51 320 aaKnown RBP23.06■■□□□ 1.28
CPNE1-202ENST00000352393 YIF1BQ5BJH7 314 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 ADAMTSL4Q6UY14 1074 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 RIPOR3Q96MK2 946 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 SLC38A2Q96QD8 506 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 C17orf62Q9BQA9 187 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 TM7SF3Q9NS93 570 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 MAU2Q9Y6X3 613 aa23.06■■□□□ 1.28
CPNE1-202ENST00000352393 A0A0G2JPF8 293 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 FAM170BA6NMN3 283 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 HNRNPCL2B2RXH8 293 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 HNRNPCL3B7ZW38 293 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 PRRT4C9JH25 899 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 LALBAP00709 142 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 HNRNPCL4P0DMR1 293 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 GAAP10253 952 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 APEX1P27695 318 aaKnown RBP23.05■■□□□ 1.28
CPNE1-202ENST00000352393 PTGER1P34995 402 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 MAP2K3P46734 347 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ANXA11P50995 505 aaKnown RBP23.05■■□□□ 1.28
CPNE1-202ENST00000352393 GNA13Q14344 377 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 METRNLQ641Q3 311 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 CNIH2Q6PI25 160 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 RASSF6Q6ZTQ3 369 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ZNF438Q7Z4V0 828 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 LRRTM4Q86VH4 590 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ARIH2OSQ8N7S6 290 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ZFP41Q8N8Y5 198 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 LINC01555Q8NAE3 123 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 POGLUT1Q8NBL1 392 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 LRRC3BQ96PB8 259 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 YIPF4Q9BSR8 244 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-202ENST00000352393 EDDM13A0A1B0GTR0 161 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 CPN2P22792 545 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 SLC1A3P43003 542 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ERVFC1P60507 584 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 MADCAM1Q13477 382 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 LASP1Q14847 261 aaKnown RBP23.05■■□□□ 1.28
CPNE1-202ENST00000352393 FNDC3BQ53EP0 1204 aaKnown RBP23.05■■□□□ 1.28
CPNE1-202ENST00000352393 CAMK1GQ96NX5 476 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 ARHGDIGQ99819 225 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 FAIM2Q9BWQ8 316 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 COMMD3Q9UBI1 195 aa23.05■■□□□ 1.28
CPNE1-202ENST00000352393 SYT5O00445 386 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 HMGN2P05204 90 aaKnown RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 IFNGR2P38484 337 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 PRKAG1P54619 331 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 MAP4K2Q12851 820 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 Q5BKY6 102 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 PRAMEF8Q5VWM4 474 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 PRAMEF7Q5VXH5 474 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 TYW3Q6IPR3 259 aaKnown RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 METAP1DQ6UB28 335 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 PRICKLE2Q7Z3G6 844 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 TCTE3Q8IZS6 198 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 UBASH3BQ8TF42 649 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 ZNF296Q8WUU4 475 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 BBS4Q96RK4 519 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 DCLRE1CQ96SD1 692 aaKnown RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 BEX2Q9BXY8 128 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 PRRG3Q9BZD7 231 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 QRSL1Q9H0R6 528 aaKnown RBP23.04■■□□□ 1.28
CPNE1-202ENST00000352393 WDR70Q9NW82 654 aa23.04■■□□□ 1.28
CPNE1-202ENST00000352393 LRIT2A6NDA9 550 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 CASKO14936 926 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 TAS2R41P59536 307 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 ELAVL3Q14576 367 aaKnown RBP23.03■■□□□ 1.28
CPNE1-202ENST00000352393 TRIM48Q8IWZ4 208 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms