RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ITPAQ9BY32 194 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 LINC01565O15544 149 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 AHSA1O95433 338 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 GPR75O95800 540 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 IFNA7P01567 189 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 CDK4P11802 303 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TNFRSF17Q02223 184 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 KEAP1Q14145 624 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 GTDC1Q4AE62 458 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 IQCHQ86VS3 1027 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TSPYL5Q86VY4 417 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 OR8J1Q8NGP2 316 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 KAT2AQ92830 837 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 PFDN5Q99471 154 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SPOCK3Q9BQ16 436 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 CPSF4LA6NMK7 179 aaKnown RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TPST2O60704 377 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 CD160O95971 181 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 DHFRP00374 187 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SDC2P34741 201 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 CRISP1P54107 249 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SIM1P81133 766 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM196Q5HYL7 178 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 PRAMEF8Q5VWM4 474 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 PRAMEF7Q5VXH5 474 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM184AQ6ZMB5 413 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 C19orf47Q8N9M1 422 aaKnown RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 FGF14Q92915 247 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM80Q96HE8 168 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TSSK6Q9BXA6 273 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM168Q9H0V1 697 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 FAM118AQ9NWS6 357 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 KRT33AO76009 404 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 IL1RNP18510 177 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 FMO3P31513 532 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SSX2Q16385 188 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 TIGD6Q17RP2 521 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 HSD17B12Q53GQ0 312 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 C6orf141Q5SZD1 244 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 IER5LQ5T953 404 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 FAM71E1Q6IPT2 247 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF619Q8N2I2 560 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SLC44A3Q8N4M1 653 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 PMM1Q92871 262 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 DPH2Q9BQC3 489 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 CSTAP01040 98 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 PGCP20142 388 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 HLCSP50747 726 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 ID2Q02363 134 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 NPRL3Q12980 569 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 SLC27A4Q6P1M0 643 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 IL17RCQ8NAC3 791 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF300Q96RE9 604 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 GABRG3Q99928 467 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 POLR2J2Q9GZM3 115 aaKnown RBP11.49□□□□□ -0.57
SMAD9-201ENST00000350148 UCKL1Q9NWZ5 548 aa11.49□□□□□ -0.57
SMAD9-201ENST00000350148 KIAA0100Q14667 2235 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 DAPL1A0PJW8 107 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 PDCD5O14737 125 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SSX5O60225 188 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 KLHL26Q53HC5 615 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TPRG1LQ5T0D9 272 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SYT13Q7L8C5 426 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 KIAA0907Q7Z7F0 614 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 LMNTD1Q8N9Z9 388 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF548Q8NEK5 533 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 OR4K17Q8NGC6 315 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TRUB1Q8WWH5 349 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 OR1E3Q8WZA6 343 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF354BQ96LW1 612 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF597Q96LX8 424 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 GFM1Q96RP9 751 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 S100A13Q99584 98 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 LYRM4Q9HD34 91 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CKLFQ9UBR5 152 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CD300AQ9UGN4 299 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SH3PXD2BA1X283 911 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TRAPPC13A5PLN9 417 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ANTXRLA6NF34 631 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 NDUFV2P19404 249 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SLC6A8P48029 635 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 GBX2P52951 348 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 DNASE1L3Q13609 305 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 DSG2Q14126 1118 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TTLL10Q6ZVT0 673 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 GRHL3Q8TE85 626 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 BCL7BQ9BQE9 202 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms