RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 PRG2P13727 222 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ATP5A1P25705 553 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC4-202ENST00000345795 TMED10P49755 219 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 APOFQ13790 326 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ZNHIT3Q15649 155 aaPredicted RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 ZNF691Q5VV52 312 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ZNF347Q96SE7 839 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 CPNE7Q9UBL6 633 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 TRAV27A0A087WT01 109 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 URADA6NGE7 173 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 RAD1O60671 282 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 HSD3B1P14060 373 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 HSD3B2P26439 372 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ACADLP28330 430 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 LIPAP38571 399 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 MICAQ29983 383 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 GGTA1PQ4G0N0 100 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 HLA-DQA1Q5Y7H0 255 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 ATOH1Q92858 354 aaPredicted RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 HDHD2Q9H0R4 259 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 GPATCH2Q9NW75 528 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 SPTBN5Q9NRC6 3674 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 PTPRDP23468 1912 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 PEX12O00623 359 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 NPC1O15118 1278 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 CDRT1O95170 752 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 LRIF1Q5T3J3 769 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 C8orf82Q6P1X6 216 aaPredicted RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 SIX5Q8N196 739 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 LNX2Q8N448 690 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 OR4F15Q8NGB8 312 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 OR52L1Q8NGH7 329 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 RACGAP1Q9H0H5 632 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 C2orf42Q9NWW7 574 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 EXO1Q9UQ84 846 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 SLCO1B1Q9Y6L6 691 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 CD8B2A6NJW9 211 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 EIF3FO00303 357 aaPredicted RBP12.52□□□□□ -0.4
CASC4-202ENST00000345795 NDUFB5O43674 189 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 MED26O95402 600 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 CTSBP07858 339 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 CD8BP10966 210 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 PSMA1P25786 263 aaKnown RBP12.52□□□□□ -0.4
CASC4-202ENST00000345795 PCGF2P35227 344 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 ACVR1BP36896 505 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 PDX1P52945 283 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 LIM2P55344 173 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 SEC23BQ15437 767 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 FAM131AQ6UXB0 335 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 BORCS5Q969J3 196 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 ITPAQ9BY32 194 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 MYNNQ9NPC7 610 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 SLC7A7Q9UM01 511 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.4
CASC4-202ENST00000345795 CTDSP2O14595 271 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 PIP5K1CO60331 668 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 UGDHO60701 494 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 ITGA1P56199 1179 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 PYDC2Q56P42 97 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 RSBN1Q5VWQ0 802 aaPredicted RBP12.52□□□□□ -0.41
CASC4-202ENST00000345795 SLC22A16Q86VW1 577 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 PHOSPHO1Q8TCT1 267 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 SETD7Q8WTS6 366 aaKnown RBP12.52□□□□□ -0.41
CASC4-202ENST00000345795 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 TMEM165Q9HC07 324 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 SLC6A20Q9NP91 592 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 NKIRAS2Q9NYR9 191 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 DOK2O60496 412 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 GCGRP47871 477 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 CDH11P55287 796 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 DUSP2Q05923 314 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 FADDQ13158 208 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 AQP6Q13520 282 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 KRT74Q7RTS7 529 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 GPR135Q8IZ08 494 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 LRRC25Q8N386 305 aaPredicted RBP12.52□□□□□ -0.41
CASC4-202ENST00000345795 OR2L5Q8NG80 312 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms