RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 H0YAE9 185 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PRKNO60260 465 aaPredicted RBP12.67□□□□□ -0.38
CDC42-202ENST00000344548 TPST2O60704 377 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 TNFAIP8O95379 198 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 IFNW1P05000 195 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 SSTR4P31391 388 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 GCGRP47871 477 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 CCL7P80098 99 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PIN1Q13526 163 aaPredicted RBP12.67□□□□□ -0.38
CDC42-202ENST00000344548 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 TCEAL6Q6IPX3 200 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 DEF8Q6ZN54 512 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 METTL25Q8N6Q8 603 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 TCEAL3Q969E4 200 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 UBE2FQ969M7 185 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 PIP5K1AQ99755 562 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 CXorf21Q9HAI6 301 aa12.67□□□□□ -0.38
CDC42-202ENST00000344548 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 GXYLT2A0PJZ3 443 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 ASNA1O43681 348 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 PDE9AO76083 593 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 NTN1O95631 604 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 POU2F1P14859 743 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 MAP3K8P41279 467 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 CLK3P49761 638 aaKnown RBP12.66□□□□□ -0.38
CDC42-202ENST00000344548 HOXC5Q00444 222 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 KCNC4Q03721 635 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 GRM7Q14831 915 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 SEC23BQ15437 767 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 NPTX1Q15818 432 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 CTU2Q2VPK5 515 aaKnown RBP12.66□□□□□ -0.38
CDC42-202ENST00000344548 FAM214AQ32MH5 1076 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 GARNL3Q5VVW2 1013 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
CDC42-202ENST00000344548 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 CLIP4Q8N3C7 705 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 ATG16L2Q8NAA4 619 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 OR52R1Q8NGF1 315 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 SGCDQ92629 289 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 PROX1Q92786 737 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
CDC42-202ENST00000344548 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 PRTFDC1Q9NRG1 225 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 NDOR1Q9UHB4 597 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 KCNE5Q9UJ90 142 aa12.66□□□□□ -0.38
CDC42-202ENST00000344548 A0A0G2JPF8 293 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 HNRNPCL2B2RXH8 293 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 HNRNPCL3B7ZW38 293 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 GDF9O60383 454 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 CTNSO60931 367 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 SERPINB7O75635 380 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 HNRNPCL4P0DMR1 293 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 ETS2P15036 469 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 IL7RP16871 459 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 ARL4DP49703 201 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 RAPSNQ13702 412 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 APOFQ13790 326 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 MAPK14Q16539 360 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 C1orf189Q5VU69 101 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 TYW3Q6IPR3 259 aaKnown RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 C16orf62Q7Z3J2 963 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 CCDC71Q8IV32 467 aaPredicted RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 PIK3C3Q8NEB9 887 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 ZNF675Q8TD23 568 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 NRBF2Q96F24 287 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 SDF2Q99470 211 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 RIBC2Q9H4K1 309 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 LANCL2Q9NS86 450 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 FGF21Q9NSA1 209 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 KCND3Q9UK17 655 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 A4GNTQ9UNA3 340 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 A0A087WV62 115 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 OR10H2O60403 315 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 TIAF1O95411 115 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 LGI1O95970 557 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 RPLP0P05388 317 aaKnown RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
CDC42-202ENST00000344548 RHCEP18577 417 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 ARHGDIAP52565 204 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 HMGA2P52926 109 aa12.65□□□□□ -0.38
CDC42-202ENST00000344548 STX4Q12846 297 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms