RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PRODH2Q9UF12 536 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 PPIEQ9UNP9 301 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ANGPT4Q9Y264 503 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 FARSAQ9Y285 508 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 IGHV3-20A0A0C4DH32 117 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 A0A1W2PQ72 361 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 TTC36A6NLP5 189 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 NME6O75414 186 aaPredicted RBP9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 TFPTP0C1Z6 253 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 RPS15P62841 145 aaKnown RBP9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 MYBPC3Q14896 1274 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 MTX3Q5HYI7 312 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 ATAD3BQ5T9A4 648 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 FAM69BQ5VUD6 431 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 GLYATQ6IB77 296 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 PAPD4Q6PIY7 484 aaKnown RBP9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 CYP2R1Q6VVX0 501 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 RNF111Q6ZNA4 994 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF321PQ8N8H1 164 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 SLC16A11Q8NCK7 471 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 HIPK4Q8NE63 616 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 OR52E4Q8NGH9 312 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 SLC9A6Q92581 669 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 OTUB1Q96FW1 271 aaPredicted RBP9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 LRGUKQ96M69 825 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 MESP1Q9BRJ9 268 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 PIGUQ9H490 435 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 DUSP22Q9NRW4 184 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 CFL2Q9Y281 166 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF451Q9Y4E5 1061 aa9.52□□□□□ -0.88
VIPAS39-201ENST00000327028 PIEZO1Q92508 2521 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 TMEM247A6NEH6 219 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 AQP12BA6NM10 295 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 OR6C76A6NM76 312 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 CREG1O75629 220 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SOX30O94993 753 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NKX2-2O95096 273 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 BCHEP06276 602 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 C8BP07358 591 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 MMP11P24347 488 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 DLSTP36957 453 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 FUT5Q11128 374 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 GNA13Q14344 377 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNHIT3Q15649 155 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 DUSP5Q16690 384 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 INTS11Q5TA45 600 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 HEPHL1Q6MZM0 1159 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 REEP3Q6NUK4 255 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 CCDC80Q76M96 950 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 WDR53Q7Z5U6 358 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 DTX1Q86Y01 620 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 AQP12AQ8IXF9 295 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NFAM1Q8NET5 270 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 OR1N1Q8NGS0 311 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 C16orf52Q8NHV5 167 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC38A5Q8WUX1 472 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 XAGE5Q8WWM1 108 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 FAM162AQ96A26 154 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC35A4Q96G79 324 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 TMEM19Q96HH6 336 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NSMCE2Q96MF7 247 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 LPAR4Q99677 370 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NUDT9Q9BW91 350 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 THSD1Q9NS62 852 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 EXD2Q9NVH0 621 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 LIPT1Q9Y234 373 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 DTX4Q9Y2E6 619 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PRAMEF27A3QJZ7 478 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 C5orf58C9J3I9 102 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC28A2O43868 658 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 GPR143P51810 404 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PCBP3P57721 371 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 RPS18P62269 152 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PCOLCEQ15113 449 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 MAPK11Q15759 364 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PRAMEF8Q5VWM4 474 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PRAMEF7Q5VXH5 474 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SPATA24Q86W54 205 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 CDS1Q92903 461 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NKD1Q969G9 470 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 C8orf44Q96CB5 159 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 ITPAQ9BY32 194 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 SEMA4CQ9C0C4 833 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF700Q9H0M5 742 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PCDHGB3Q9Y5G1 929 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 PCDHGA6Q9Y5G7 932 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 KCNE3Q9Y6H6 103 aa9.52□□□□□ -0.89
VIPAS39-201ENST00000327028 IGHV1-45A0A0A0MS14 117 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 LOC101059948A0A1B0GTJ6 334 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 TCRBV5S2A0A599 114 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 TCRBV3S1A0A5B6 114 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SOCS6O14544 535 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 ENTPD5O75356 428 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SEC24DO94855 1032 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 AK1P00568 194 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 NR2F1P10589 423 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms