RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 LARS2Q15031 903 aaKnown RBP14.46□□□□□ -0.09
VARS2-201ENST00000321897 SPERTQ8NA61 448 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 DNAJB8Q8NHS0 232 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 AHCYL2Q96HN2 611 aaKnown RBP14.46□□□□□ -0.09
VARS2-201ENST00000321897 MED30Q96HR3 178 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 SLIRPQ9GZT3 109 aaKnown RBP14.46□□□□□ -0.09
VARS2-201ENST00000321897 CDCP1Q9H5V8 836 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 BRD7Q9NPI1 651 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 STUB1Q9UNE7 303 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 HSPE1-MOB4S4R3N1 261 aa14.46□□□□□ -0.09
VARS2-201ENST00000321897 EDDM13A0A1B0GTR0 161 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 KAT7O95251 611 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 IGFBP1P08833 259 aaPredicted RBP14.46□□□□□ -0.1
VARS2-201ENST00000321897 ILF3Q12906 894 aaKnown RBP eCLIP14.46□□□□□ -0.1
VARS2-201ENST00000321897 GAB1Q13480 694 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 COMMD2Q86X83 199 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 RBM18Q96H35 190 aaKnown RBP14.46□□□□□ -0.1
VARS2-201ENST00000321897 ZNF300Q96RE9 604 aaPredicted RBP14.46□□□□□ -0.1
VARS2-201ENST00000321897 NMNAT1Q9HAN9 279 aaPredicted RBP14.46□□□□□ -0.1
VARS2-201ENST00000321897 NLGN3Q9NZ94 848 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 CLEC2DQ9UHP7 191 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 NEU3Q9UQ49 428 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 STON1Q9Y6Q2 735 aa14.46□□□□□ -0.1
VARS2-201ENST00000321897 B4DGG1 531 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 GTPBP1O00178 669 aaKnown RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 GPLD1P80108 840 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ACVR1Q04771 509 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 SP140Q13342 867 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ZNF234Q14588 700 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ZNHIT3Q15649 155 aaPredicted RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 KLHL22Q53GT1 634 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ZNF689Q96CS4 500 aaPredicted RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 DOK1Q99704 481 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 PIP5K1AQ99755 562 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 CDADC1Q9BWV3 514 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 CACNG6Q9BXT2 260 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 PAK6Q9NQU5 681 aaPredicted RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 MUTYHQ9UIF7 546 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 POLHQ9Y253 713 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 PTPRFP10586 1907 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ZDBF2Q9HCK1 2354 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 DAPL1A0PJW8 107 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 FAM183AA6NL82 134 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 FABP7O15540 132 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 HRGP04196 525 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 CST5P28325 142 aaPredicted RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 RPS19P39019 145 aaKnown RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 MAGEA2P43356 314 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 MRPL58Q14197 206 aaKnown RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 NDUFAF5Q5TEU4 345 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 HTR3DQ70Z44 454 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 RFT1Q96AA3 541 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 NIPSNAP1Q9BPW8 284 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 PSD2Q9BQI7 771 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ABCG4Q9H172 646 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 COMMD9Q9P000 198 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 DNAJC13O75165 2243 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 ATP6V1G2-DDX39BF2Z307 99 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 RFXAPO00287 272 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 PPM1DO15297 605 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 KCNK5O95279 499 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 HLA-DPB1P04440 258 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 CAPZA2P47755 286 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 P2RX3P56373 397 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 GMFBP60983 142 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 AMZ1Q400G9 498 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 KIF18BQ86Y91 864 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 RBM45Q8IUH3 476 aaKnown RBP14.45□□□□□ -0.1
VARS2-201ENST00000321897 SIMC1Q8NDZ2 872 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 GON7Q9BXV9 100 aa14.45□□□□□ -0.1
VARS2-201ENST00000321897 H3BNC9 293 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 RPP14O95059 124 aaKnown RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 IGLV3-27P01718 113 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 ITGAMP11215 1152 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 ZNF10P21506 573 aaPredicted RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 NUP62P37198 522 aaPredicted RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 SUOXP51687 545 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 SNTA1Q13424 505 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 CCNJQ5T5M9 372 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 MLIPQ5VWP3 458 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 HLA-DQA1Q5Y7H0 255 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 OLFML2AQ68BL7 652 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 LHX8Q68G74 356 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 SLC30A6Q6NXT4 461 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 KLBQ86Z14 1044 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 TP53I13Q8NBR0 393 aaPredicted RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 TOR1AIP2Q8NFQ8 470 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 MCHR1Q99705 422 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 ACTL8Q9H568 366 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 STARD5Q9NSY2 213 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 WDR45Q9Y484 360 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 RTTNQ86VV8 2226 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 CSN2P05814 226 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 SRPRAP08240 638 aaKnown RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 MPC1LP0DKB6 136 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 HOXB2P14652 356 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 PFN3P60673 137 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 SELENOWP63302 87 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 GALEQ14376 348 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms