RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 B3GNT8Q7Z7M8 397 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TTLQ8NG68 377 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 OR52E4Q8NGH9 312 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 GOT1L1Q8NHS2 421 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 FBXO30Q8TB52 745 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 CCDC120Q96HB5 630 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 NEDD4LQ96PU5 975 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 DPH2Q9BQC3 489 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 DPH7Q9BTV6 452 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TPT1P8Q9HAU6 139 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 UCKL1Q9NWZ5 548 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 A0A075B6Q4 140 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 PLD2O14939 933 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 GSTA4O15217 222 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SCELO95171 688 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 C6orf47O95873 294 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 MT-ND2P03891 347 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 NUDT7P0C024 238 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 HOXB6P17509 224 aaKnown RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 PXNP49023 591 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SNRPNP63162 240 aaKnown RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CSNK2BP67870 215 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CHRNB3Q05901 458 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 LRRC32Q14392 662 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF793Q6ZN11 406 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SERPINA11Q86U17 422 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 LINC00518Q8N0U6 118 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 LCN9Q8WX39 176 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 UCK2Q9BZX2 261 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SLAMF7Q9NQ25 335 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TMEM184CQ9NVA4 438 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 MAPRE3Q9UPY8 281 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 MAGED1Q9Y5V3 778 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 EML5Q05BV3 1969 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 LRIT2A6NDA9 550 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CLEC3AO75596 197 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 OR2B3O76000 313 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CHMP24386 653 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CTSKP43235 329 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TCF15Q12870 199 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 DGCR6Q14129 220 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 UBXN2BQ14CS0 331 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TOR1AIP1Q5JTV8 583 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 CPZQ66K79 652 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 EID3Q8N140 333 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SYNPOQ8N3V7 929 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 OR4M2Q8NGB6 313 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 OR4A15Q8NGL6 344 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 PPCDCQ96CD2 204 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SLC6A18Q96N87 628 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SARGQ9BW04 601 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 C3orf14Q9HBI5 128 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 DCAF13Q9NV06 445 aaKnown RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 OR6C2Q9NZP2 312 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 NUFIP1Q9UHK0 495 aaKnown RBP12.3□□□□□ -0.44
CPNE1-201ENST00000317677 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
CPNE1-201ENST00000317677 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 A0A1W2PPC4 97 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 ISM1B1AKI9 464 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 BCKDKO14874 412 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SEC14L5O43304 696 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 RETP07949 1114 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 THEGLP0DJG4 465 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 TGFBR1P36897 503 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 STARD6P59095 220 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 ABATP80404 500 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 RHAGQ02094 409 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SLAMF1Q13291 335 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 KEAP1Q14145 624 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 GPR18Q14330 331 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 VMACQ2NL98 169 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 COX20Q5RI15 118 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF782Q6ZMW2 699 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-201ENST00000317677 GALNT10Q86SR1 603 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 PAQR7Q86WK9 346 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 KIF18BQ86Y91 864 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 DEFB119Q8N690 84 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 OR10Q1Q8NGQ4 319 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 OR5K1Q8NHB7 308 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms