RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 RAB8BQ92930 207 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 NECTIN4Q96NY8 510 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 SECISBP2Q96T21 854 aaKnown RBP12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 COQ3Q9NZJ6 369 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 MAS1P04201 325 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TP53P04637 393 aaPredicted RBP12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 ADRB3P13945 408 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 CD9P21926 228 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 EMX2Q04743 252 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 ZNF529Q6P280 563 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 NAT8LQ8N9F0 302 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TMEM175Q9BSA9 504 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TMEM45AQ9NWC5 275 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TTC3P53804 2025 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TGM6O95932 706 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 CHRNB2P17787 502 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 CD79BP40259 229 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 GINS1Q14691 196 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 PEX11GQ96HA9 241 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 MMP27Q9H306 513 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 TIMM8AO60220 97 aaPredicted RBP12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 HTR3BO95264 441 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 APBB3O95704 486 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 ELK4P28324 431 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 GRPRP30550 384 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 ACVR1BP36896 505 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 RABIFP47224 123 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 WDR92Q96MX6 357 aa12.28□□□□□ -0.44
SPTBN2-201ENST00000309996 CBX7O95931 251 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 POU3F2P20265 443 aaPredicted RBP12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 FAM46BQ96A09 425 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 TPPP3Q9BW30 176 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 TPSD1Q9BZJ3 242 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 YIPF1Q9Y548 306 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 PCYT1BQ9Y5K3 369 aaPredicted RBP12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 CENPBD1B2RD01 187 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 CKMT1AP12532 417 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 SOX9P48436 509 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 MYBPHQ13203 477 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 NCBP2-AS2Q69YL0 99 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 FBXL22Q6P050 247 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 CSNK1A1LQ8N752 337 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 OR51Q1Q8NH59 317 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 MAF1Q9H063 256 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 COL20A1Q9P218 1284 aa12.27□□□□□ -0.44
SPTBN2-201ENST00000309996 MTMR11A4FU01 709 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SLC16A5O15375 505 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 KDELR3O43731 214 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 GSK3AP49840 483 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 TMEM236Q5W0B7 351 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 IL20RBQ6UXL0 311 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 OR1S1Q8NH92 325 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SNX18Q96RF0 628 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 NXF5Q9H1B4 397 aaKnown RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SRA1Q9HD15 236 aaKnown RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 POT1Q9NUX5 634 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 DVL1O14640 695 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ASGR2P07307 311 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ANXA7P20073 488 aaKnown RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 DNASE1P24855 282 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 GDF1P27539 372 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 DVL1P1P54792 670 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 F2RL1P55085 397 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ZNF829Q3KNS6 432 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ESX1Q8N693 406 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SLC35F5Q8WV83 523 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 A8MVM7 634 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 APOC3P02656 99 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 GGT5P36269 586 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 TMEM115Q12893 351 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 PRAMEF8Q5VWM4 474 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 PRAMEF7Q5VXH5 474 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 C22orf42Q6IC83 251 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 EPGNQ6UW88 154 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 LRRC57Q8N9N7 239 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 IL1F10Q8WWZ1 152 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 A0A1W2PQ09 198 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 F5H5K5 113 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 GABARAPH6UMI1 98 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 H7BY64 318 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 GABARAPO95166 117 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 CD34P28906 385 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ACVRL1P37023 503 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 IDH3GP51553 393 aaPredicted RBP12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 ZNF674Q2M3X9 581 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.45
SPTBN2-201ENST00000309996 SYPL2Q5VXT5 272 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms