RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SERINC3Q13530 473 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GRIN2CQ14957 1233 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MED27Q6P2C8 311 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 BAGE3Q86Y29 109 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 BAGE2Q86Y30 109 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KCTD13Q8WZ19 329 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DDX1Q92499 740 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC6A7Q99884 636 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TRAF4Q9BUZ4 470 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DPEP3Q9H4B8 488 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KCNIP1Q9NZI2 227 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DNAJC5BQ9UF47 199 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SFTPBP07988 381 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ITGA5P08648 1049 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SSR2P43308 183 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ADIGQ0VDE8 80 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SGCGQ13326 291 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ASAH1Q13510 395 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZBTB37Q5TC79 503 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 LMNTD1Q8N9Z9 388 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FAM83FQ8NEG4 500 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 C7orf34Q96L11 122 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PCYT2Q99447 389 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35D1Q9NTN3 355 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PHIPQ8WWQ0 1821 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 B4DEV8 164 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 JUNDP17535 347 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PSMB4P28070 264 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PBX1P40424 430 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MFGE8Q08431 387 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MKRN4PQ13434 485 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZYXQ15942 572 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DUOXA1Q1HG43 343 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MINDY4Q4G0A6 757 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR5H2Q8NGV7 314 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35B2Q8TB61 432 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GNPNAT1Q96EK6 184 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 COPS3Q9UNS2 423 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC7A11Q9UPY5 501 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SBF1O95248 1867 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CEP192Q8TEP8 1941 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DPM1O60762 260 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MATN4O95460 622 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 LINC00032P0C843 101 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RAP1AP62834 184 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TLE1Q04724 770 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GPR50Q13585 617 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UBE2SQ16763 222 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR4M1Q8NGD0 313 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR4D10Q8NGI6 311 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RAB24Q969Q5 203 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 AKT1S1Q96B36 256 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DAZAP1Q96EP5 407 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 LRFN3Q9BTN0 628 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 AGPAT4Q9NRZ5 378 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 K7EPK0 472 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SIGLEC6O43699 453 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GGT1P19440 569 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CCNOP22674 350 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KCNC1P48547 511 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 STK19P49842 368 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PNRC1Q12796 327 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MLLT11Q13015 90 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MRPL49Q13405 166 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PABPC1L2AQ5JQF8 200 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FAM171A1Q5VUB5 890 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 REC114Q7Z4M0 266 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 JAGN1Q8N5M9 183 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FAM71E2Q8N5Q1 922 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR10K1Q8NGX5 313 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR2AJ1Q8NGZ0 328 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NELL2Q99435 816 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CCNL1Q9UK58 526 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MMP24Q9Y5R2 645 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 LRIT2A6NDA9 550 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SNRPGP15A8MWD9 76 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 H0Y8G0 127 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MGMTP16455 207 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CTRB1P17538 263 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CKMT2P17540 419 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 HRH2P25021 359 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FASLGP48023 281 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CXCR3P49682 368 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GPR33Q49SQ1 333 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CTRB2Q6GPI1 263 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TCTEX1D1Q8N7M0 179 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CCDC74AQ96AQ1 378 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ARSGQ96EG1 525 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DUSP26Q9BV47 211 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KATNB1Q9BVA0 655 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ASB8Q9H765 288 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RNF146Q9NTX7 359 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF223Q9UK11 482 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RGPD5Q99666 1765 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NPIPA5E9PKD4 350 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NPIPA3F8WFD2 350 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NDUFS8O00217 210 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SPDEFO95238 335 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms