RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ATXN7L3Q14CW9 347 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 C6orf132Q5T0Z8 1188 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 RABEPKQ7Z6M1 372 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 SLC25A44Q96H78 314 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 MACROD1Q9BQ69 325 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 A0A0A6YYC8 382 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 I3L1I5 382 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 AMY2BP19961 511 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 CDNFQ49AH0 187 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 LRRC37A5PQ49AS3 106 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 HTR3DQ70Z44 454 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 PARS2Q7L3T8 475 aaKnown RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 PDZD3Q86UT5 571 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 OR52E1Q8NGJ3 308 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 HDAC2Q92769 488 aaKnown RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 URM1Q9BTM9 101 aaKnown RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 NUP50Q9UKX7 468 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 TRIM64BA6NI03 449 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 SLC22A31A6NKX4 558 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 PNCKQ6P2M8 343 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 ZBTB8BQ8NAP8 495 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF442Q9H7R0 627 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 M0R036 132 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 CD6P30203 668 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 MC3RP41968 323 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 GJA8P48165 433 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 CD97P48960 835 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 HTR6P50406 440 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 CDKN3Q16667 212 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 C22orf42Q6IC83 251 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 SLC18B1Q6NT16 456 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 VTCN1Q7Z7D3 282 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-201ENST00000293441 MTMR10Q9NXD2 777 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 RNF215Q9Y6U7 377 aa16.41■□□□□ 0.22
SHANK1-201ENST00000293441 RGS9O75916 674 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 EMP2P54851 167 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 TLE3Q04726 772 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 LETMD1Q6P1Q0 360 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 CLEC1AQ8NC01 280 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 GALNT6Q8NCL4 622 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 CD200R1Q8TD46 325 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 RFT1Q96AA3 541 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 RDH12Q96NR8 316 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 RBM24Q9BX46 236 aaKnown RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PRDM4Q9UKN5 801 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PRSS38A1L453 326 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 SLC9B1P1A6NJY1 282 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 DLGAP1O14490 977 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 ZFP41Q8N8Y5 198 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 SORBS1Q9BX66 1292 aaKnown RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 SMCO3A2RU48 225 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 TSPAN4O14817 238 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF789Q5FWF6 425 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PLBD1Q6P4A8 553 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 NANOS1Q8WY41 292 aaKnown RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 MS4A4EQ96PG1 132 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 CCM2LQ9NUG4 571 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 LDB3O75112 727 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PPP1R3DO95685 299 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 RHBDF1Q96CC6 855 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF285Q96NJ3 590 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 VDAC3Q9Y277 283 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 EEF1E1O43324 174 aaKnown RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 FMO6PO60774 539 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 RBBP9O75884 186 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 TIMP2P16035 220 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 THBS2P35442 1172 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 TNFRSF4P43489 277 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 TUBB3Q13509 450 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 EIF5AL1Q6IS14 154 aaKnown RBP16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PTERQ96BW5 349 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 PPP1R14BQ96C90 147 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 DTD2Q96FN9 168 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 KCNIP3Q9Y2W7 256 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 MYH15Q9Y2K3 1946 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 H0YAE9 185 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 CSF2P04141 144 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 SH3BGRL2Q9UJC5 107 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 GPR52Q9Y2T5 361 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 ADAM18Q9Y3Q7 739 aa16.4■□□□□ 0.22
SHANK1-201ENST00000293441 IFNA7P01567 189 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 CD79AP11912 226 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 PRAMEF8Q5VWM4 474 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 PRAMEF7Q5VXH5 474 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 RANBP10Q6VN20 620 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 NRMQ8IXM6 262 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF619Q8N2I2 560 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 MINDY1Q8N5J2 469 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF431Q8TF32 576 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 SFXN2Q96NB2 322 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 KATNBL1Q9H079 304 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ENTPD2Q9Y5L3 495 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 CER1O95813 267 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms