RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ARHGDIGQ99819 225 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 PINK1Q9BXM7 581 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 TEX101Q9BY14 249 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 TP63Q9H3D4 680 aaPredicted RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 UBE2ZQ9H832 354 aaPredicted RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ZCCHC3Q9NUD5 404 aaKnown RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 SLC9A8Q9Y2E8 581 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 CHST2Q9Y4C5 530 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 N6AMT1Q9Y5N5 214 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 KCNE3Q9Y6H6 103 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 A0A0G2JN53 185 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 A0A1W2PR48 441 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 HNRNPCL2B2RXH8 293 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 SYT5O00445 386 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 MYL12BO14950 172 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 PGRMC2O15173 223 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 PRODHO43272 600 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 GSTM3P21266 225 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 DRD3P35462 400 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ARFIP1P53367 373 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 WNT4P56705 351 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 RAB40BQ12829 278 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 CEBPEQ15744 281 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ATAD3CQ5T2N8 411 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ANKRD54Q6NXT1 300 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 HSDL2Q6YN16 418 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 QSOX2Q6ZRP7 698 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 MMAAQ8IVH4 418 aaKnown RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 CNRIP1Q96F85 164 aaPredicted RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ZNF649Q9BS31 505 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 SPATA5L1Q9BVQ7 753 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 ABCB9Q9NP78 766 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 PRSS16Q9NQE7 514 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 LIPT1Q9Y234 373 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 CARD8Q9Y2G2 431 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 KLHL20Q9Y2M5 609 aa11.7□□□□□ -0.54
BEST3-201ENST00000266661 YARS2Q9Y2Z4 477 aaKnown RBP11.7□□□□□ -0.54
BEST3-201ENST00000266661 A0A1W2PQ09 198 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 IGLON5A6NGN9 336 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 CYP7B1O75881 506 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 HMGN2P05204 90 aaKnown RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 FGF9P31371 208 aaPredicted RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 TRIM23P36406 574 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 DDOSTP39656 456 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 BCL6P41182 706 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 CLCNKAP51800 687 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 NCBP2P52298 156 aaKnown RBP eCLIP11.69□□□□□ -0.54
BEST3-201ENST00000266661 SMSP52788 366 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 MINDY4Q4G0A6 757 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 ZNF628Q5EBL2 1059 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 XKRXQ6PP77 449 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 PRICKLE2Q7Z3G6 844 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 GNPDA2Q8TDQ7 276 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 DIO2Q92813 273 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 HLA-CQ95604 372 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 KIAA1143Q96AT1 154 aaPredicted RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 MS4A6EQ96DS6 147 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 ZFYVE19Q96K21 471 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 SNX18Q96RF0 628 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 C17orf62Q9BQA9 187 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 SARGQ9BW04 601 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 SAP130Q9H0E3 1048 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 SLC38A1Q9H2H9 487 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 EGLN3Q9H6Z9 239 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 SYNPO2LQ9H987 977 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 DEC1Q9P2X7 70 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 ACSL5Q9ULC5 683 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
BEST3-201ENST00000266661 NINQ8N4C6 2090 aa11.69□□□□□ -0.54
BEST3-201ENST00000266661 RGS5O15539 181 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 KLF4O43474 513 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SH3BP5O60239 455 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 UBXN7O94888 489 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PCCBP05166 539 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 CSF3P09919 207 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 TEAD1P28347 426 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PPP2R1BP30154 601 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 PKLRP30613 574 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 IL12RB1P42701 662 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SSR2P43308 183 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 OMPP47874 163 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 SLC9A3P48764 834 aa11.68□□□□□ -0.54
BEST3-201ENST00000266661 TSPAN31Q12999 210 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms