RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 RORCP51449 518 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 BLKP51451 505 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 TAGLNQ01995 201 aaKnown RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 TAP2Q03519 686 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 GLYR1Q49A26 553 aaPredicted RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 PAMR1Q6UXH9 720 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 THOC6Q86W42 341 aaKnown RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 NAGSQ8N159 534 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 SLC37A2Q8TED4 501 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 NELL1Q92832 810 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 CAMK1GQ96NX5 476 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 TAPBPLQ9BX59 468 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 IL21RQ9HBE5 538 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 CMAHPQ9Y471 501 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 SLC16A5O15375 505 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 YY2O15391 372 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 B3GALT4O96024 378 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 CSF3P09919 207 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 GNSP15586 552 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 EPORP19235 508 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 HOXC5Q00444 222 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 DDX39BQ13838 428 aaKnown RBP11.91□□□□□ -0.5
PRPF6-201ENST00000266079 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 SLC32A1Q9H598 525 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 GPR27Q9NS67 375 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 TAC3Q9UHF0 121 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 GMEB2Q9UKD1 530 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 PCDHGB3Q9Y5G1 929 aa11.91□□□□□ -0.5
PRPF6-201ENST00000266079 RP1P56715 2156 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 E7EQ34 232 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CASC3O15234 703 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PDPK1O15530 556 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PRAMEF4O60810 478 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 NME1P15531 152 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CTRB1P17538 263 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 TYRP1P17643 537 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ALAS2P22557 587 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CHMP24386 653 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 MAPK9P45984 424 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PNLIPRP1P54315 467 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 RUNX1T1Q06455 604 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PRAMEF9Q5VWM5 478 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 LAMTOR1Q6IAA8 161 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ADNP2Q6IQ32 1131 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 FAM131AQ6UXB0 335 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 UNC5DQ6UXZ4 953 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 TRIM46Q7Z4K8 759 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 TMPRSS11BQ86T26 416 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 LINC01555Q8NAE3 123 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 GPBAR1Q8TDU6 330 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ZDHHC1Q8WTX9 485 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 LCN9Q8WX39 176 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 C7orf34Q96L11 122 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 FEVQ99581 238 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 GTPBP2Q9BX10 602 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 MS4A12Q9NXJ0 267 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 EIF3KQ9UBQ5 218 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ZNF451Q9Y4E5 1061 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PCDHGA2Q9Y5H1 932 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 DMXL1Q9Y485 3027 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 SNTNA6NMZ2 147 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ULK1O75385 1050 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 KCNK5O95279 499 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 SPTBP11277 2137 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 NAGAP17050 411 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 PTGS2P35354 604 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 CLDN8P56748 225 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 GPR18Q14330 331 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 SUZ12Q15022 739 aaKnown RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 GPR19Q15760 415 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 RNF165Q6ZSG1 346 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ADCK2Q7Z695 626 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 ENKURQ8TC29 256 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 NEIL2Q969S2 332 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 COL25A1Q9BXS0 654 aaPredicted RBP11.9□□□□□ -0.5
PRPF6-201ENST00000266079 HDHD5Q9BXW7 423 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 DNAJC11Q9NVH1 559 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 GPRC5BQ9NZH0 403 aa11.9□□□□□ -0.5
PRPF6-201ENST00000266079 SNRNP200O75643 2136 aaKnown RBP11.9□□□□□ -0.51
PRPF6-201ENST00000266079 NUP214P35658 2090 aaPredicted RBP11.9□□□□□ -0.51
PRPF6-201ENST00000266079 RFXANKO14593 260 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 PDE9AO76083 593 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 STATHP02808 62 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 ADRA2AP08913 450 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRPF6-201ENST00000266079 MAPK12P53778 367 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 CHIT1Q13231 466 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 SAXO2Q658L1 398 aa11.89□□□□□ -0.51
PRPF6-201ENST00000266079 VANGL1Q8TAA9 524 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms