RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 H3BNH8 94 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 KHNYNO15037 678 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 SIGLEC6O43699 453 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 BMP7P18075 431 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 CCNA2P20248 432 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 RBM44Q6ZP01 1051 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 AHSA2Q719I0 299 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 TMEM151BQ8IW70 566 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 OR5M3Q8NGP4 307 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 ZNF563Q8TA94 476 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 SFXN5Q8TD22 340 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 RORBQ92753 470 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 OR6C1Q96RD1 312 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 IL4I1Q96RQ9 567 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 CXorf56Q9H5V9 222 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 MRTO4Q9UKD2 239 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 THADAQ6YHU6 1953 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 MDC1Q14676 2089 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 SHISA7A6NL88 538 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 C4orf51C9J302 202 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 UPK1AO00322 258 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PLOD2O00469 737 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 ZNF749O43361 778 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 MAN1A2O60476 641 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PLXNA2O75051 1894 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 DNAJB6O75190 326 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 SNRNP200O75643 2136 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 TBX6O95947 436 aaPredicted RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 ALPLP05186 524 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 ETS2P15036 469 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 AGXTP21549 392 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 IL12BP29460 328 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 SSTR4P31391 388 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PCBP4P57723 403 aaKnown RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 ST3GAL3Q11203 375 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 DECR1Q16698 335 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PRSS53Q2L4Q9 553 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 INAVAQ3KP66 663 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 CLEC12AQ5QGZ9 265 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 GUSBP11Q6P575 273 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 TLDC1Q6P9B6 456 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 CA13Q8N1Q1 262 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 TEX47Q8TBZ9 253 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 GATA6Q92908 595 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 CLDN23Q96B33 292 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 ZNF354BQ96LW1 612 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 OSBPL10Q9BXB5 764 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 EPB41L1Q9H4G0 881 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 RERGLQ9H628 205 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 NMNAT1Q9HAN9 279 aaPredicted RBP8.73□□□□□ -1.01
SSR3-201ENST00000265044 USE1Q9NZ43 259 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PTGFRNQ9P2B2 879 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PLXNB3Q9ULL4 1909 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 SLC6A14Q9UN76 642 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 POFUT2Q9Y2G5 429 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 IFT52Q9Y366 437 aa8.73□□□□□ -1.01
SSR3-201ENST00000265044 PCDH17O14917 1159 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 POLR1CO15160 346 aaPredicted RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 TNFSF14O43557 240 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 HEXBP07686 556 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 FBXW4P57775 412 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 RPP38P78345 283 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 NPRL3Q12980 569 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 RABEPKQ7Z6M1 372 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 RBM45Q8IUH3 476 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 ZNF595Q8IYB9 648 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CNIH3Q8TBE1 160 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 GAB3Q8WWW8 586 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 TVP23BQ9NYZ1 205 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 NDUFAF4Q9P032 175 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CACNA1CQ13936 2221 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 ENO4A6NNW6 628 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PCDHGA12O60330 932 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 FCMRO60667 390 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 NUDT6P53370 316 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 TOP3AQ13472 1001 aaPredicted RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 SERTAD2Q14140 314 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 SNAPC1Q16533 368 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 VWA2Q5GFL6 755 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 GARNL3Q5VVW2 1013 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 MFSD12Q6NUT3 480 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 SLC29A4Q7RTT9 530 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PAPD5Q8NDF8 572 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 PIGXQ8TBF5 258 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PHOSPHO1Q8TCT1 267 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 ADAMTS18Q8TE60 1221 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 DAZLQ92904 295 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 RDH12Q96NR8 316 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CTRCQ99895 268 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 DCUN1D5Q9BTE7 237 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 ANKRD60Q9BZ19 345 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PRRG3Q9BZD7 231 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CLN6Q9NWW5 311 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PRODH2Q9UF12 536 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms