RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 FAM227AF5H4B4 570 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 H2AFB2P0C5Z0 115 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 LIMS3P0CW19 117 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 LIMS4P0CW20 117 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 ZNF3P17036 446 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 NPR2P20594 1047 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 HOXA1P49639 335 aaPredicted RBP19.32■□□□□ 0.68
RARA-201ENST00000254066 CDK5Q00535 292 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 RELQ04864 619 aaPredicted RBP19.32■□□□□ 0.68
RARA-201ENST00000254066 FAM198BQ6UWH4 519 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 SEZ6L2Q6UXD5 910 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 SLC36A4Q6YBV0 504 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 OR2T35Q8NGX2 323 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 HASPINQ8TF76 798 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 RNFT2Q96EX2 444 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 FUZQ9BT04 418 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 WRAP53Q9BUR4 548 aaKnown RBP19.32■□□□□ 0.68
RARA-201ENST00000254066 COPS3Q9UNS2 423 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 SLC22A14Q9Y267 594 aa19.32■□□□□ 0.68
RARA-201ENST00000254066 LOC105369274A0A096LPK9 316 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 G3V3Q6 166 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 NCR1O76036 304 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SNAI1O95863 264 aaPredicted RBP19.31■□□□□ 0.68
RARA-201ENST00000254066 TFPIP10646 304 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 RPL3P39023 403 aaKnown RBP19.31■□□□□ 0.68
RARA-201ENST00000254066 GIPRP48546 466 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SSTP61278 116 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 IRF8Q02556 426 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 C2orf80Q0P641 193 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 ST3GAL2Q16842 350 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SLC36A2Q495M3 483 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 LRRC56Q8IYG6 542 aaPredicted RBP19.31■□□□□ 0.68
RARA-201ENST00000254066 OR4N4Q8N0Y3 316 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 OR56B4Q8NH76 319 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 HSD17B8Q92506 261 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SUSD3Q96L08 255 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 PITHD1Q9GZP4 211 aaPredicted RBP19.31■□□□□ 0.68
RARA-201ENST00000254066 SHISA3A0PJX4 238 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 H0YIV9 168 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 DRD2P14416 443 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 MAOBP27338 520 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SMSP52788 366 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 PTPRRQ15256 657 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 Q3ZCU0 254 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 REEP3Q6NUK4 255 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 RASSF6Q6ZTQ3 369 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 SFXN2Q96NB2 322 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 CACNG6Q9BXT2 260 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 REEP4Q9H6H4 257 aa19.31■□□□□ 0.68
RARA-201ENST00000254066 ANKDD1BA6NHY2 528 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 TBX18O95935 607 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 MPC1LP0DKB6 136 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 CTGFP29279 349 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 MTNR1AP48039 350 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 VSX2P58304 361 aaPredicted RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 RPL6Q02878 288 aaKnown RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 C10orf120Q5SQS8 335 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 B3GNTL1Q67FW5 361 aaPredicted RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 RNF175Q8N4F7 328 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 BRD7Q9NPI1 651 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 TMEM161AQ9NX61 479 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 PRKAG2Q9UGJ0 569 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 DPP7Q9UHL4 492 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 CRLS1Q9UJA2 301 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 AIPO00170 330 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 PRAF2O60831 178 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 GPR37L1O60883 481 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 ITGA10O75578 1167 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 NSG1P42857 185 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 GINS1Q14691 196 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 MPPE1Q53F39 396 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 KRT74Q7RTS7 529 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 CFAP52Q8N1V2 620 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 RPLP0P6Q8NHW5 317 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 ASB11Q8WXH4 323 aa19.3■□□□□ 0.68
RARA-201ENST00000254066 LCORQ96JN0 433 aaPredicted RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 ING1Q9UK53 422 aaPredicted RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 PPIEQ9UNP9 301 aaKnown RBP19.3■□□□□ 0.68
RARA-201ENST00000254066 LRRTM2O43300 516 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 EEF1E1O43324 174 aaKnown RBP19.29■□□□□ 0.68
RARA-201ENST00000254066 SSNA1O43805 119 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 ECDO95905 644 aaPredicted RBP19.29■□□□□ 0.68
RARA-201ENST00000254066 NMBP08949 121 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 GRK4P32298 578 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 TCTN3Q6NUS6 607 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 NLRC3Q7RTR2 1065 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 KANSL1Q7Z3B3 1105 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 TOMM5Q8N4H5 51 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 BVESQ8NE79 360 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 OR52N1Q8NH53 320 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 SPATA5L1Q9BVQ7 753 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 TMPRSS13Q9BYE2 586 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 ZNF106Q9H2Y7 1883 aaKnown RBP19.29■□□□□ 0.68
RARA-201ENST00000254066 H3BNC9 293 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 PRRG1O14668 218 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 CLDN11O75508 207 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 SOX30O94993 753 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 TIA1P31483 386 aaKnown RBP eCLIP19.29■□□□□ 0.68
RARA-201ENST00000254066 SLC1A3P43003 542 aa19.29■□□□□ 0.68
RARA-201ENST00000254066 ERVK-21P61565 698 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms