RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CASP12Q6UXS9 341 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 CREB3L2Q70SY1 520 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 ZNF764Q96H86 408 aaPredicted RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 SPACA7Q96KW9 195 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 FAM83DQ9H4H8 585 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 TIGARQ9NQ88 270 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 RBFOX1Q9NWB1 397 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 NUFIP1Q9UHK0 495 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 KCNE2Q9Y6J6 123 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 DOCK9Q9BZ29 2069 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 PRR23AA6NEV1 266 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 MYL12BO14950 172 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 SPINT1O43278 529 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 TMCC2O75069 709 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 RAB36O95755 333 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 M6PRP20645 277 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 XPAP23025 273 aaPredicted RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 CFL1P23528 166 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 IMPA1P29218 277 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 LIM2P55344 173 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 RAB25P57735 213 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 DSTNP60981 165 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 TARDBPQ13148 414 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNX3-201ENST00000230085 EFR3AQ14156 821 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 HEPACAMQ14CZ8 416 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 GPR19Q15760 415 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 SNAP47Q5SQN1 464 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 ZNF730Q6ZMV8 503 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 DEFB119Q8N690 84 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 ELMO1Q92556 727 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 DMRTB1Q96MA1 342 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 KCTD7Q96MP8 289 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 TSSK6Q9BXA6 273 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 GPR174Q9BXC1 333 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 PPP1R3EQ9H7J1 279 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 PLSCR3Q9NRY6 295 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 RAB23Q9ULC3 237 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 SF3B6Q9Y3B4 125 aaKnown RBP19.37■□□□□ 0.69
SNX3-201ENST00000230085 ASB4Q9Y574 426 aa19.37■□□□□ 0.69
SNX3-201ENST00000230085 PLXND1Q9Y4D7 1925 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 A0A1W2PQL4 384 aaPredicted RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 A8MX80 341 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 ZNF780AO75290 641 aaPredicted RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 CDRT1O95170 752 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 TP53P04637 393 aaPredicted RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 XKP51811 444 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 RPS13P62277 151 aaKnown RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 NAE1Q13564 534 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 DDX39BQ13838 428 aaKnown RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 KLHL22Q53GT1 634 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 QSOX2Q6ZRP7 698 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 COMMD6Q7Z4G1 85 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 TMEM163Q8TC26 289 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 C16orf78Q8WTQ4 265 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 RAB7BQ96AH8 199 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 NEURL3Q96EH8 262 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 FYTTD1Q96QD9 318 aaKnown RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 PRRX2Q99811 253 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 MMP28Q9H239 520 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 DMRT3Q9NQL9 472 aa19.36■□□□□ 0.69
SNX3-201ENST00000230085 MRPL39Q9NYK5 338 aaKnown RBP19.36■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3DA0A087WVF3 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3IA0A087WXS9 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3EA0A087X179 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3KA0A087X1G2 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TRBV4-1A0A0J9YWV2 114 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SLC5A10A0PJK1 596 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3FA6NER0 549 aaPredicted RBP19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3LB9A6J9 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 ERVH48-1M5A8F1 160 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SLC43A1O75387 559 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 CYP7B1O75881 506 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 KLHL18O94889 574 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SEMA4FO95754 770 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3HP0C7X1 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 POU2F1P14859 743 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SDC2P34741 201 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 MAP2K3P46734 347 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 GAS1P54826 345 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 DCST1Q5T197 706 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3GQ6DHY5 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SIGIRRQ6IA17 410 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3CQ6IPX1 549 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 MZT2BQ6NZ67 158 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 ARMCX6Q7L4S7 300 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 MRGPREQ86SM8 312 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 TBC1D3Q8IZP1 549 aaPredicted RBP19.35■□□□□ 0.69
SNX3-201ENST00000230085 OR4K1Q8NGD4 311 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 DIRAS2Q96HU8 199 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 KCNJ15Q99712 375 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 MARVELD1Q9BSK0 173 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 R4GN57 208 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 DNAH14Q0VDD8 3507 aa19.35■□□□□ 0.69
SNX3-201ENST00000230085 SGK494L7N484 410 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 CHI3L1P36222 383 aaPredicted RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 GSTM5P46439 218 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 CLDN20P56880 219 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 RPL6Q02878 288 aaKnown RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 TCTN3Q6NUS6 607 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 PGBD2Q6P3X8 592 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms