RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 HCFC2Q9Y5Z7 792 aa8.89□□□□□ -0.99
HLA-DOA-201ENST00000229829 SESN1Q9Y6P5 492 aa8.89□□□□□ -0.99
HLA-DOA-201ENST00000229829 MN1Q10571 1320 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF197O14709 1029 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TPST2O60704 377 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CSO75390 466 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 IFNW1P05000 195 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 HBQ1P09105 142 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 C1GALT1C1LP0DN25 315 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TYRP14679 529 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF30P17039 623 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 RHCEP18577 417 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TAP2Q03519 686 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CRYZQ08257 329 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 EXOSC2Q13868 293 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 MFSD13AQ14CX5 517 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 LAMTOR1Q6IAA8 161 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 VN1R5Q7Z5H4 357 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 IQCF1Q8N6M8 205 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 SYT14Q8NB59 555 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC38A5Q8WUX1 472 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 UCN3Q969E3 161 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 FOPNLQ96NB1 174 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 C12orf57Q99622 126 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CLN6Q9NWW5 311 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TMCC3Q9ULS5 477 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PLXNA2O75051 1894 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 H3BN98 237 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TLR4O00206 839 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CASKO14936 926 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CCL16O15467 120 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 B4GALT2O60909 372 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 CBX5P45973 191 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TLE2Q04725 743 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF630Q2M218 657 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TCTN3Q6NUS6 607 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TEX261Q6UWH6 196 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TMIGD1Q6UXZ0 262 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 GDPD1Q8N9F7 314 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC9A6Q92581 669 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 RBPMSQ93062 196 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 VWCEQ96DN2 955 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC25A19Q9HC21 320 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 UBQLN2Q9UHD9 624 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 NCKAP1Q9Y2A7 1128 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 U3KQ87 197 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TRAV20A0A0B4J274 112 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ANKDD1BA6NHY2 528 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 LYRM1O43325 122 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 OR10H3O60404 316 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 IFNA7P01567 189 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PTX3P26022 381 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PTGER1P34995 402 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 ETV6P41212 452 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 AVPR1BP47901 424 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PER3P56645 1201 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PCDH1Q08174 1060 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PUDPQ08623 228 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 LARS2Q15031 903 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 MEX3DQ86XN8 651 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TRAPPC5Q8IUR0 188 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 BOLLQ8N9W6 283 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 FAM46DQ8NEK8 389 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 VN1R2Q8NFZ6 395 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC22A8Q8TCC7 542 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 APOBEC4Q8WW27 367 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 TTC9Q92623 222 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 OTUB1Q96FW1 271 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 OR2AG1Q9H205 316 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 MIEF1Q9NQG6 463 aa8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 LSM2Q9Y333 95 aaKnown RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 PCYT1BQ9Y5K3 369 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOA-201ENST00000229829 MTCL1Q9Y4B5 1905 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 DSPPQ9NZW4 1301 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 TBX6O95947 436 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 LRG1P02750 347 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SCG5P05408 212 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SDC2P34741 201 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CRYBB2P43320 205 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CAPZA2P47755 286 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ALDH9A1P49189 494 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 DEFB103AP81534 67 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CSTF1Q05048 431 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ANGPT1Q15389 498 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 P2RY14Q15391 338 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CRTC2Q53ET0 693 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SHEQ5VZ18 495 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 WASH2PQ6VEQ5 465 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 DEF8Q6ZN54 512 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 TRMT11Q7Z4G4 463 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 COMTD1Q86VU5 262 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms