RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SPIN4Q56A73 249 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ZNF691Q5VV52 312 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 LACC1Q8IV20 430 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 DMRTC2Q8IXT2 367 aaPredicted RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 ZNF675Q8TD23 568 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 RAB8BQ92930 207 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 SLC19A3Q9BZV2 496 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ACSL6Q9UKU0 697 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 SCML1Q9UN30 329 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ASB1Q9Y576 335 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ASPDHA6ND91 283 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 HBQ1P09105 142 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 IL7P13232 177 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 C6P13671 934 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 PTX3P26022 381 aaPredicted RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 CCR4P51679 360 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 CLCN7P51798 805 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 FBXW4P57775 412 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 RAB8AP61006 207 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 FOXK1P85037 733 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 SCARB2Q14108 478 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 ELAVL3Q14576 367 aaKnown RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 Q6ZSR9 355 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 OR8J3Q8NGG0 315 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 NFKBIDQ8NI38 313 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 DUS3LQ96G46 650 aaKnown RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 ZNF583Q96ND8 569 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 COL21A1Q96P44 957 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 KXD1Q9BQD3 176 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 SLC12A9Q9BXP2 914 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 SLIRPQ9GZT3 109 aaKnown RBP10.03□□□□□ -0.8
VPS18-201ENST00000220509 KCNH6Q9H252 994 aa10.03□□□□□ -0.8
VPS18-201ENST00000220509 PIPSLA2A3N6 862 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 TCAPO15273 167 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 PDE9AO76083 593 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 GADD45GO95257 159 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 IGLV3-27P01718 113 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 HTRA4P83105 476 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 RGS1Q08116 209 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 LRRC32Q14392 662 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 PRSS36Q5K4E3 855 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ENPP7Q6UWV6 458 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 SEZ6L2Q6UXD5 910 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ERN2Q76MJ5 926 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 TIPARPQ7Z3E1 657 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 MRPL43Q8N983 215 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 OR8K5Q8NH50 307 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ADAMTS15Q8TE58 950 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 UFD1Q92890 307 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 RERGQ96A58 199 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 LMLNQ96KR4 655 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 HDHD2Q9H0R4 259 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 OPN3Q9H1Y3 402 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 DPEP2Q9H4A9 486 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 PDFQ9HBH1 243 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 SLAMF7Q9NQ25 335 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 RDH8Q9NYR8 311 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 RHCGQ9UBD6 479 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 COMMD3Q9UBI1 195 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZNF222Q9UK12 451 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 NDRG2Q9UN36 371 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 MEIOCA2RUB1 952 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ERI3O43414 337 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 OR10H2O60403 315 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 UGT2B17O75795 530 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CAPNS1P04632 268 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 LAMP1P11279 417 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CEBPBP17676 345 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 PAICSP22234 425 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 PNLIPRP1P54315 467 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CLDN8P56748 225 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 GABARAPL2P60520 117 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 SLC7A9P82251 487 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 BNC1Q01954 994 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ALG11Q2TAA5 492 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZMAT1Q5H9K5 638 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CDK20Q8IZL9 346 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 MAL2Q969L2 176 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ACPTQ9BZG2 426 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 IL1RAPQ9NPH3 570 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 FAM120CQ9NX05 1096 aaKnown RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 PMS2P1A4D2B8 440 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 IGLON5A6NGN9 336 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 FZD6O60353 706 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZNF10P21506 573 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 RPS3P23396 243 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS18-201ENST00000220509 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
VPS18-201ENST00000220509 RAB13P51153 203 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CCR8P51685 355 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 SPCS3P61009 180 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 CDK6Q00534 326 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZNF763Q0D2J5 394 aa10.02□□□□□ -0.81
VPS18-201ENST00000220509 ZNF169Q14929 603 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms