RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 SCO2O43819 266 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 HCN1O60741 890 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 FHP07954 510 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRP54-201ENST00000216774 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 CEBPBP17676 345 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 MYL9P24844 172 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 PTBP1P26599 531 aaKnown RBP eCLIP12.51□□□□□ -0.418e-9■■■■□ 22.1
SRP54-201ENST00000216774 CDK3Q00526 305 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
SRP54-201ENST00000216774 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 SLC9A5Q14940 896 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 GPR19Q15760 415 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 LCN1P1Q5VSP4 162 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
SRP54-201ENST00000216774 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 GALNT12Q8IXK2 581 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 RAB7BQ96AH8 199 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 HDAC8Q9BY41 377 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 RNF121Q9H920 327 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 YARS2Q9Y2Z4 477 aaKnown RBP12.51□□□□□ -0.41
SRP54-201ENST00000216774 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
SRP54-201ENST00000216774 SLC6A11P48066 632 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 TAS2R41P59536 307 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 FABP5Q01469 135 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 TRAM2Q15035 370 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 GPAT3Q53EU6 434 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 POGLUT1Q8NBL1 392 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 ING5Q8WYH8 240 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 TM9SF2Q99805 663 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 ARHGDIGQ99819 225 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 GDF15Q99988 308 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 RERGLQ9H628 205 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 TM7SF3Q9NS93 570 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 ACSL5Q9ULC5 683 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
SRP54-201ENST00000216774 MUC22E2RYF6 1773 aaPredicted RBP12.51□□□□□ -0.41
SRP54-201ENST00000216774 A0A0G2JN53 185 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 PLA2G10O15496 165 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 SERPIND1P05546 499 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 YES1P07947 543 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 CCL5P13501 91 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 HLA-DMAP28067 261 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 P2RY2P41231 377 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ARFIP1P53367 373 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 PRKAG1P54619 331 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ACSM1Q08AH1 577 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 LASP1Q14847 261 aaKnown RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 ZIC1Q15915 447 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 OLIG3Q7RTU3 272 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ADCK2Q7Z695 626 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 CAMKK1Q8N5S9 505 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 OR8D4Q8NGM9 314 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ZC3HAV1LQ96H79 300 aaKnown RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 RNF170Q96K19 258 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 TEX12Q9BXU0 123 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 AICDAQ9GZX7 198 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 DENND4AQ7Z401 1863 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 IGKV1-8A0A0C4DH67 115 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 A8MV72 311 aaPredicted RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 C1QTNF3-AMACRE9PGA6 284 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 PPM1DO15297 605 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 PROM1O43490 865 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 CHST10O43529 356 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 APOL3O95236 402 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 CPN2P22792 545 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 IFNA8P32881 189 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 SLC1A3P43003 542 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 CLCNKAP51800 687 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 PRR5P85299 388 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 DSG2Q14126 1118 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 QPRTQ15274 297 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.5□□□□□ -0.412e-6■■□□□ 13.9
SRP54-201ENST00000216774 ZNF311Q5JNZ3 666 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 NOXA1Q86UR1 476 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 SYT14Q8NB59 555 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ATP6V1C2Q8NEY4 427 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 DIO2Q92813 273 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 OSTF1Q92882 214 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 OTUB1Q96FW1 271 aaPredicted RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 MED17Q9NVC6 651 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 CALML5Q9NZT1 146 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 DEC1Q9P2X7 70 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms