RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 SGCZQ96LD1 299 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 MMP27Q9H306 513 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 IFT52Q9Y366 437 aa12.94□□□□□ -0.34
TGFBR3-201ENST00000212355 AGAP5A6NIR3 686 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 HNRNPKP61978 463 aaKnown RBP eCLIP12.93□□□□□ -0.341e-7■■□□□ 13
TGFBR3-201ENST00000212355 BEX5Q5H9J7 111 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEM164Q5U3C3 297 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 EEF1A1P5Q5VTE0 462 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ECHDC3Q96DC8 303 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RANBP3Q9H6Z4 567 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 VSX1Q9NZR4 365 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 PTGESO14684 152 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 MARVELD2Q8N4S9 558 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 DTWD1Q8N5C7 304 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RADILQ96JH8 1075 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TSNAXQ99598 290 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RGCCQ9H4X1 137 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 DCDC2BA2VCK2 349 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 CD53P19397 219 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 IL4RP24394 825 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 SHMT2P34897 504 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 CDKN2CP42773 168 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 POU4F3Q15319 338 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ALG10BQ5I7T1 473 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 BEST3Q8N1M1 668 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ABCC6O95255 1503 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM183AA6NL82 134 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TPPPO94811 219 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ADRB3P13945 408 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 HSD3B1P14060 373 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 P2RY14Q15391 338 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RPLP0P6Q8NHW5 317 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM71F1Q96KD3 344 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF442Q9H7R0 627 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 H0YAE9 185 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 SNNO75324 88 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 HSD3B2P26439 372 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 TUBA3CQ13748 450 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF181Q2M3W8 571 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 ELP5Q8TE02 316 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
TGFBR3-201ENST00000212355 RHCEP18577 417 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 MAPK3P27361 379 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SSTR2P30874 369 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 ZNF45Q02386 682 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 HNF4GQ14541 408 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM205BPQ63HN1 556 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 DENND1AQ8TEH3 1009 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 H3BMQ9 156 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 HPGDSO60760 199 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 IVDP26440 423 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 CTXN1P60606 82 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 NSDHLQ15738 373 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 ANKRD54Q6NXT1 300 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 B3GLCTQ6Y288 498 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEM135Q86UB9 458 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 COG8Q96MW5 612 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 CNN2Q99439 309 aaKnown RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 PTGES2Q9H7Z7 377 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 ASB6Q9NWX5 421 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 NPPAP01160 153 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SPINT3P49223 89 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 TAS2R38P59533 333 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SELPLGQ14242 412 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SPRYD4Q8WW59 207 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SCGB3A2Q96PL1 93 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 AMY2AP04746 511 aa12.92□□□□□ -0.34
TGFBR3-201ENST00000212355 NDUFV2P19404 249 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms