RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Slc38a1Q8K2P7 485 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nup58Q8R332 587 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pcdhb6Q91XZ4 772 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cd209eQ91ZW7 208 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nck1Q99M51 377 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mrm2Q9CPY0 246 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Aar2Q9D2V5 384 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gpn3Q9D3W4 284 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 4933407L21RikQ9D476 131 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Spsb1Q9D5L7 273 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 OcstampQ9D611 498 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Prorsd1Q9D820 169 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Actl7bQ9QY83 418 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tk2Q9R088 270 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 FancmQ8BGE5 2021 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 AfdnQ9QZQ1 1820 aaKnown RBP8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm7356A0A087WSA6 508 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn2r48E9Q5D8 855 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rdh16f1E9Q9P8 317 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Arl9F7BE40 171 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn2r97K7N6Z2 861 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GzmkO35205 263 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ifna4P07351 186 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cntn1P12960 1020 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 RabggtbP53612 339 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Npas2P97460 816 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NfibP97863 570 aaKnown RBP8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Serpina3mQ03734 418 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cntnap5bQ0V8T8 1292 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 FcamrQ2TB54 535 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Apcdd1Q3U128 514 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ugt2b36Q3UEP4 530 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 AgerQ62151 402 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 SypQ62277 314 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Larp4bQ6A0A2 741 aaKnown RBP8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 G6pc3Q6NSQ9 346 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Klhl6Q6V595 619 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Proser3Q7TSA6 634 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Znf12Q7TSI0 686 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cers6Q8C172 384 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 ZxdcQ8C8V1 858 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rdh9Q8K5C8 317 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fam151aQ8QZW3 608 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 CipcQ8R0W1 432 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn1r200Q8R281 312 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ppp1r8Q8R3G1 351 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rem2Q8VEL9 341 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Caskin2Q8VHK1 1201 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Akr1c21Q91WR5 323 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tcf19Q99KJ5 263 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MynnQ99MD8 610 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 TMEM121BQ99MX7 572 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GpnmbQ99P91 574 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Krt88Q9CPR6 171 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Klhl1Q9JI74 751 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MyotQ9JIF9 496 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hyou1Q9JKR6 999 aaKnown RBP8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GghQ9Z0L8 317 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Crlf3Q9Z2L7 442 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sall1Q9ER74 1322 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm4756A0A140LIS8 335 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Otud3B1AZ99 396 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm3594E9Q2A7 267 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rfpl4bJ3QPR6 266 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Atn1O35126 1175 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 H2afxP27661 143 aaKnown RBP8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 CebpbP28033 296 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 CckbrP56481 453 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tm9sf2P58021 662 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pstpip1P97814 415 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rsu1Q01730 277 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Arntl2Q2VPD4 579 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rufy4Q3TYX8 563 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ndst1Q3UHN9 882 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cdk15Q3V3A1 433 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Wfdc8Q4KUS1 273 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Krt33bQ61897 404 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc13a5Q67BT3 572 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ppp2r1bQ7TNP2 601 aaKnown RBP8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Kxd1Q80XH1 177 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pex26Q8BGI5 305 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm6377Q8BHV4 303 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Arhgap12Q8C0D4 838 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cpne5Q8JZW4 593 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MepceQ8K3A9 666 aaKnown RBP8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lin28aQ8K3Y3 209 aaKnown RBP8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Glb1lQ8VC60 646 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ces1Q8VCC2 565 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rnf130Q8VEM1 419 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1310Q8VF85 312 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr697Q8VFM4 317 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hint3Q9CPS6 165 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nudcd2Q9CQ48 157 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Upk3bl1Q9D701 249 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cnot8Q9D8X5 292 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ift46Q9DB07 301 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Entpd4Q9DBT4 613 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nudt5Q9JKX6 218 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Prr14lE9Q7C4 1971 aa8.53□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ktn1Q61595 1327 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms