RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Znf569Q80W31 679 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Smyd4Q8BTK5 799 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Fbxw14Q8C2Y5 466 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Unc5dQ8K1S2 956 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gulp1Q8K2A1 304 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nmral1Q8K2T1 309 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Vmn1r75Q8R289 305 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gipc3Q8R5M0 297 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 TapbplQ8VD31 451 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cacng6Q8VHW3 260 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ppp1r16aQ923M0 524 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc22a30Q96LX3 552 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc25a30Q9CR58 291 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cpn2Q9DBB9 547 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mkrn2Q9ERV1 416 aaKnown RBP12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 PalmdQ9JHU2 551 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pole3Q9JKP7 145 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 ChmlQ9QZD5 621 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ighv6-6A0A075B5T3 119 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rex2A2AWF2 685 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Vmn1r27K7N688 303 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zfp934K7N6H3 473 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 C1dO35473 141 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hoxa4P06798 285 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 BckdhaP50136 442 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Col6a2Q02788 1034 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Q3TYS2 187 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zfp280bQ505F4 534 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nox3Q672J9 568 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Shc2Q8BMC3 573 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gen1Q8BMI4 908 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 TtpaQ8BWP5 278 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tmem72Q8C3K5 275 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rae1Q8C570 368 aaKnown RBP12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Lysmd4Q8CC84 293 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tmem106aQ8VC04 261 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ankrd54Q91WK7 299 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tnfrsf21Q9EPU5 655 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 NpvfQ9ESQ8 188 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 ClpxQ9JHS4 634 aaKnown RBP12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dclk1Q9JLM8 756 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 B4galt6Q9WVK5 382 aa12.72□□□□□ -0.37
Nup88-201ENSMUST00000035283 1700028J19RikA0A0U1RP08 172 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Spin2-ps6A0A140T8V2 174 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm8973D3YX71 104 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 2610021A01RikE9Q0Q3 834 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 E030030I06RikJ3QML9 246 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gtpbp1O08582 668 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Prl7a1O54830 266 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Klrb1aP27811 227 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ceacam1P31809 521 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Taf1aP97357 453 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr629Q0VBH3 314 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tcfl5Q32NY8 489 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zdhhc20Q5Y5T1 380 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sema3bQ62177 748 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 SypQ62277 314 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 C1qtnf6Q6IR41 264 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Szrd1Q6NXN1 152 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pgr15lQ80T54 456 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ppp1r15bQ8BFW3 697 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Fbxo30Q8BJL1 746 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfm2Q8BM13 448 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Wdfy2Q8BUB4 400 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sall4Q8BX22 1067 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sphk1Q8CI15 382 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Vmn1r83Q8R287 306 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Erlec1Q8VEH8 483 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1467Q8VFW1 308 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 NifkQ91VE6 317 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ceacam2Q925P2 520 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trim13Q9CYB0 407 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ebna1bp2Q9D903 306 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 1700086D15RikQ9D9E9 151 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sppl2aQ9JJF9 523 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr396-ps1A0A0U1RNF5 211 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Xpnpep2B1AVD1 674 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Vmn2r115E9Q0E7 857 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr172E9Q8F6 309 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm11397F6V5V4 377 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr209L7N1X3 305 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc6a6O35316 621 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cldn2O88552 230 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Atp1b1P14094 304 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Wnt4P22724 351 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ctbp2P56546 445 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mtf1Q07243 675 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 CcnjQ3TZI6 379 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dennd1bQ3U1T9 766 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dvl3Q61062 716 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Elfn2Q68FM6 823 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Awat2Q6E1M8 333 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ccdc85bQ6PDY0 202 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 AY358078Q6UY53 465 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Chst9Q76EC5 413 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Kcnk12Q76M80 430 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Eri1Q7TMF2 345 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr845Q7TRG2 312 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pex12Q8VC48 359 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1284Q8VF29 311 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms