RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 NADK2Q4G0N4 442 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 HEPHL1Q6MZM0 1159 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 VANGL1Q8TAA9 524 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-208ENST00000641023 ANKRD9Q96BM1 317 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-208ENST00000641023 RSPO3Q9BXY4 272 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-208ENST00000641023 SLC38A1Q9H2H9 487 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 ADNPQ9H2P0 1102 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 TRIM45Q9H8W5 580 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-208ENST00000641023 ZNF556Q9HAH1 456 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 PRMT8Q9NR22 394 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-208ENST00000641023 HCN4Q9Y3Q4 1203 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 HSPE1-MOB4S4R3N1 261 aa16.18■□□□□ 0.18
PHGDH-208ENST00000641023 GIMD1P0DJR0 217 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CYP4B1P13584 511 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ARL4DP49703 201 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CDH15P55291 814 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 GRM7Q14831 915 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 RBM48Q5RL73 367 aaKnown RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 DEF8Q6ZN54 512 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 OLIG3Q7RTU3 272 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 SHISA5Q8N114 240 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 SLC5A8Q8N695 610 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 OR6C4Q8NGE1 309 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 HDAC2Q92769 488 aaKnown RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ALPK1Q96QP1 1244 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 APOL4Q9BPW4 351 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 PINK1Q9BXM7 581 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CXorf56Q9H5V9 222 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ADAP2Q9NPF8 381 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 HCN3Q9P1Z3 774 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 GMPPBQ9Y5P6 360 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CCDC88CQ9P219 2028 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CLDN4O14493 209 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 PCDH17O14917 1159 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 NME6O75414 186 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CCNB2O95067 398 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 LGI1O95970 557 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ALPPP05187 535 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 SMIM11AP58511 58 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 HSD11B2P80365 405 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 CHRNEQ04844 493 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 SLC13A2Q13183 592 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 RAPSNQ13702 412 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 AMZ1Q400G9 498 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ZNF311Q5JNZ3 666 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 FHL5Q5TD97 284 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 MLIPQ5VWP3 458 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ZCCHC12Q6PEW1 402 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 WDR53Q7Z5U6 358 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 ZNF595Q8IYB9 648 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 PSD2Q9BQI7 771 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 DUSP23Q9BVJ7 150 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 NMNAT1Q9HAN9 279 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 PAPOLBQ9NRJ5 636 aaKnown RBP16.17■□□□□ 0.18
PHGDH-208ENST00000641023 MAT2BQ9NZL9 334 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 RHCGQ9UBD6 479 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 BLOC1S6Q9UL45 172 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 TMCC3Q9ULS5 477 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 POFUT2Q9Y2G5 429 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 DSPPQ9NZW4 1301 aa16.17■□□□□ 0.18
PHGDH-208ENST00000641023 FITM1A5D6W6 292 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 ARRDC5A6NEK1 342 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 FFAR1O14842 300 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 OR10H2O60403 315 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 MED26O95402 600 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 SOX18P35713 384 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 CLK3P49761 638 aaKnown RBP16.16■□□□□ 0.18
PHGDH-208ENST00000641023 HLCSP50747 726 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 EMP3P54852 163 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 IL5RAQ01344 420 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 CD47Q08722 323 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 STX4Q12846 297 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 SHBQ15464 509 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 MEP1AQ16819 746 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 C6orf141Q5SZD1 244 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 TSPYL5Q86VY4 417 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-208ENST00000641023 CDRT4Q8N9R6 151 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 SIMC1Q8NDZ2 872 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 ADAMTS16Q8TE57 1224 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 GAB3Q8WWW8 586 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 CDS1Q92903 461 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 CTHRC1Q96CG8 243 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 MMABQ96EY8 250 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-208ENST00000641023 RBM18Q96H35 190 aaKnown RBP16.16■□□□□ 0.18
PHGDH-208ENST00000641023 PEX11GQ96HA9 241 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 GABARAPL3Q9BY60 117 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 PIGUQ9H490 435 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 SLC13A4Q9UKG4 626 aa16.16■□□□□ 0.18
PHGDH-208ENST00000641023 NDRG4Q9ULP0 352 aaKnown RBP16.16■□□□□ 0.18
PHGDH-208ENST00000641023 TRIM64CA6NLI5 447 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 H0YIG0 161 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 SYT5O00445 386 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 B4GAT1O43505 415 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 CTNSO60931 367 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 TDGF1P13385 188 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 EEF1B2P24534 225 aaKnown RBP16.15■□□□□ 0.18
PHGDH-208ENST00000641023 BNC1Q01954 994 aa16.15■□□□□ 0.18
PHGDH-208ENST00000641023 SRSF5Q13243 272 aaKnown RBP16.15■□□□□ 0.18
PHGDH-208ENST00000641023 TOP3AQ13472 1001 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-208ENST00000641023 NR1D2Q14995 579 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms